| Evolution
                        
                                                                                    
                                                                                            | requirements of natural selection | variation, inheritance, variable survival/reproductive success |  
                                                                                            | homology | similar origin | bat/bird wings |  
                                                                                            | analogy | similar structure | butterfly wings |  
                                                                                            | apomorphy | derived, shared traits |  
                                                                                            | plesiomorphy | ancestral, shared traits |  
                                                                                            | autapomorphy | derived, unique |  
                                                                                            | synapomorphy | derived, shared in ancestry |  
                                                                                            | homoplasy | derived, found independently in tree |  
                                                                                            | stabilizing selection | intermediately favored, average (purifying) |  
                                                                                            | directional | extreme phenotype |  
                                                                                            | disruptive | 2+ favored (diversifying) |  
                                                                                            | genetic drift | change in allele frequency due to chance | Founder- Bottleneck- |  
                                                                                            | gene flow | movement of alleles between pops | migration, seed dispersal |  
                                                                                            | hardy-weinberg | p2+2pq+q2=1 | if mutation, non-random mate, small pop size, gene flow, natural selection |  Macroevolution
                        
                                                                                    
                                                                                            | pre-fertilization barrier | prevent fert | spatial, behavior, mechanical, temporal, gamete incompatibility |  
                                                                                            | post | hybrid dies | hybrid sterility/inviable |  
                                                                                            | speciation | form new species |  
                                                                                            | punctuated speciation | short bursts |  
                                                                                            | graduated | slow changes |  phylogeny
                        
                                                                                    
                                                                                            | limitations of linnaean classifications | species may not be closely related, unrelated species placed together due to convergent evolution, related species separated, subject to reclassification if DNA indicates |  
                                                                                            | monophyletic | full clade |  
                                                                                            | paraphyletic | ancestral and some descendants |  
                                                                                            | polyphyletic | not include most common ancestor |  
                                                                                            | ingroup | species part of study |  |  | Plant History
                        
                                                                                    
                                                                                            | 470mya | origin from green algae |  
                                                                                            | 425mya | traits for life on land |  
                                                                                            | 385mya | first forests |  
                                                                                            | challenges for land plants | limited water, structural support, reproductive techniques (wind/pollinators) |  
                                                                                            | benefits | more sunlight, carbon dioxide, soil nutrients |  Seedless Vascular (pteridophyta)
                        
                                                                                    
                                                                                            | sporophyte | fertilization (diploid) visibly dominant | all seedless vascular (eg. ferns) |  
                                                                                            | gametophyte | meiosis (haploid) | moss, liverwort |  
                                                                                            | thallus | plant w/o leaf, stem, roots |  
                                                                                            | asexual repro | produce spores in sori, spores germinate |  
                                                                                            | sexual repro | prothallus produce eggs (archegonia) and sperm (antheridia), sperm fertilizes egg |  Seeded plants
                        
                                                                                    
                                                                                            | characteristics | roots, stems, leaves, vasc tissue, sporophyte dom, reproduce by seeds |  
                                                                                            | benefits of seeds | embryo protection, food reserve for embryo, dormancy, dispersal |  
                                                                                            | benefits of pollen | plants are no longer dependent on water to transport sperm |  
                                                                                            | gymnosperm | naked seed, no flower/fruit, cones | cycadophyta, gingkophyta, gnetophyta, coniferophyta |  
                                                                                            | fascicles | needle like leaf bundles (reduce stomata, need for excess photosynthesis) |  
                                                                                            | resin ducts | defend against predators |  
                                                                                            | angiosperm | vessels, seeds, fruits | 300 families, 369400 species, dominated terrestrial environment for 100+ million years |  
                                                                                            | monocots | one cotyledon, parallel veins, scattered vascular tissue, fibrous root, floral organs in 3s |  
                                                                                            | eudicots | two cotyledon, reticulate vein, ringed vasc tissue, taproot, flower organs in 4/5s |  
                                                                                            | pericarp | outer skin of flower (epi/meso/endocarps) |  
                                                                                            | simple fruit | apple |  
                                                                                            | aggregate | raspberry |  
                                                                                            | multiple | pineapple |  
                                                                                            | double fertilization | sperm (n) + egg (n) + nucleus (n) = 3n |  vascular plant anatomy
                        
                                                                                    
                                                                                            | epidermis | waxy cuticle, guard cells, stomata, protective hairs, glands |  
                                                                                            | periderm | replaces epiderm |  
                                                                                            | parenchyma | thin walls | mesophyll (ground) |  
                                                                                            | collenchyma | thick walls, flexible support |  
                                                                                            | sclerenchyma | thick walls w/ lignin for support (nonliving) |  
                                                                                            | xylem | water/minerals (roots to leaves) | both dead: tracheids (long,narrow) vessel elements (small,thick) |  
                                                                                            | phloem | nutrients (leaves to roots) | sieve tube (sugars travel, living no nucleus) companion (helper) |  
                                                                                            | indeterminate meristem | grow throughout life |  
                                                                                            | primary | height (apex) |  
                                                                                            | secondary | girth |  
                                                                                            | monocot root | distinct rings |  
                                                                                            | eudicot | star-like bundles |  
                                                                                            | root cap | zone of cell division, elongation, differentiation |  
                                                                                            | apical | dome shaped mass of dividing cells at shoot tip |  
                                                                                            | vascular cambium | secondary growth in xylem | woody plants |  
                                                                                            | cork cambium | periderm | all gymnosperms, many eudicots |  vasc plant transport
                        
                                                                                    
                                                                                            | passive transport | high to low concentration | via phospholipid bilayer, aquaporins, transporters, or channel proteins |  
                                                                                            | active | low to high | via proton pumps, transport proteins (carrier proteins) |  
                                                                                            | long distance bulk flow | through xylem/phloem | roots to shoots |  
                                                                                            | apoplast | through cell wall |  
                                                                                            | symplast | through cytoplasm |  
                                                                                            | route | cortex via apo/sym, endodermis (checkpoint for selective passage), casparian strip (blocks apoplast transfer, to cylinder made of suberin) |  
                                                                                            | suberin | complex biopolymer found on inner face of primary cell walls |  
                                                                                            | gutlation | progressive absorption capacity in roots (root pressure) |  
                                                                                            | transpiration | evaporation of water from stomata |  
                                                                                            | adhesion/cohesion | creates water columns |  
                                                                                            | tension | negative pressure created by evaporating water molecules |  
                                                                                            | guard cells | open/close to balance water conservation |  
                                                                                            | translocation | movement of nutrients via actively loaded phloem (source to sink) | by pressure flow |  
                                                                                            | source | leaves |  
                                                                                            | sink | flower |  
                                                                                            | auxin | growth, fruit development, slow leaf loss, cell division |  
                                                                                            | ehylene | ripen fruit |  
                                                                                            | absisic acid | shed leaves, seed dormancy |  |  | fungi
                        
                                                                                    
                                                                                            | 45,000 known species, estimated 2/3 million | relatives to animals |  
                                                                                            | saprotrophs | heterotrophs that obtain nutrients from organic material |  
                                                                                            | non-motile | grow toward food source |  
                                                                                            | mycorrhizae | mutualism w/ plant roots |  
                                                                                            | mycelia | networks of branched hyphae adapted for absorption | maximizes surface:volume ration (long, skinny) |  
                                                                                            | multinucleate hyphae | 1- septate, 2 - coenocytic, 1/2 - pseudo |  
                                                                                            | cryptomycota/microsporidions | parasitic, freshwater, marine, soil, closely related to fungi |  
                                                                                            | chytridomycota | 1st to evolve, zoospores, freshwater/marine, decomposers, parasites, mutualists |  
                                                                                            | zoopagomycota | nonflagellated spores, some endoparasites |  
                                                                                            | mucoromycota | zygospore fungi (fast growing molds, parasite, pathogens), mycorrhizal | arbuscular mycorrhizae |  
                                                                                            | ascomycota (sac fungi) | plant pathogens, decomp, symbionts (ascocorp = produce spores, conidiophores = branches) | 8 spores per ascus |  
                                                                                            | basidiomycota | mushrooms (basidium, basidiocarp) |  
                                                                                            | mutualists | mycorrhizae, endophytes, lichen |  animals
                        
                                                                                    
                                                                                            | protist ancestors (choanoflagellates) | 600 mya |  
                                                                                            | spicules | skeleton like structure pieces |  
                                                                                            | mesophyll | semi fluid matrix w/ amoeboid cells, produce spicules |  
                                                                                            | all chordates | notochord, dorsal hollow nerve cord, pharyngeal slits, post anal tail |  
                                                                                            | monotremes | hard shelled amniotic egg, milk from sweat glands (no nipples) | platypus |  
                                                                                            | marsupial | true pouch w/ nipples | koala, opossum |  
                                                                                            | epithelial | secrete, absorb, excrete, filter | simple (1 layer) stratified (multiple layer) |  
                                                                                            | connective | loose (few fiber), fibrous (semi solid, many fibers), adipose, cartilage, bone (rigid matrix), blood |  
                                                                                            | muscular | skeletal, cardiac, smooth |  
                                                                                            | negative feedback | keep variable close to value (do opposite) | sensor, control center, effector |  
                                                                                            | positive feedback | amplifies signal | clotting, labor contractions |  ecology
                        
                                                                                    
                                                                                            | organismal | individual | anatomy/physio/behavior |  
                                                                                            | populations | group of individuals | pop size (how/why) |  
                                                                                            | community | species | interactions |  
                                                                                            | ecosystem | energy flow/chem cycling |  
                                                                                            | landscape | mosaic of ecosystems | controlling exchange |  
                                                                                            | global | regional exchange |  
                                                                                            | global air circulation pattern | colling trade winds blow from E to W in tropics (deflection of wind from vertical paths near equator) | 30 N/S desert (dry air descends), 60 N/S wet (air mass rise, release precipitation), poles dry/frigid |  
                                                                                            | gyres | multiple currents working together |  
                                                                                            | biomes | vegetation, climate, physical (but not species) |  
                                                                                            | ecotone | area of transition between biomes |  
                                                                                            | type 1 curve | low death rates at birth | humans, elephants |  
                                                                                            | type 2 | constant death | squirrels, annual plants, lizards |  
                                                                                            | type 3 | high death rates at birth | fish, marine invert, long lived plants |  
                                                                                            | semelparity | bing bang reproduction (once and then die) | annual plants |  
                                                                                            | iteroparity | repeated reproduction | humans |  
                                                                                            | exponential growth | J shaped (ideal) |  
                                                                                            | logistic | S (realistic) |  
                                                                                            | batesian | nonvenom pretends venomous |  
                                                                                            | mullerian | bad tasting |  
                                                                                            | aposematic coloring | indicate poison |  
                                                                                            | competetive exclusion principle | no 2 species using exact resources can coexist |  
                                                                                            | eco niche partition | separate role |  
                                                                                            | temporal | opposite schedules |  
                                                                                            | fundamental niche | ideal, wider area |  
                                                                                            | realized niche | w/ competitor, narrow |  
                                                                                            | character displacement | tendency of populations to diverge in characteristics when sympatric | different beak morphology |  
                                                                                            | bottom up control | what they eat, affected by food at lower level |  
                                                                                            | top down | what eats them, affected by abundance of consumers at higher levels |  
                                                                                            | flow of energy | cannot be recycled | light |  
                                                                                            | net primary production | amt available to consumers (1/2 of GPP) |  
                                                                                            | terrestrial primary production | most in tropics (moisture, sunlight, temp, nutrients) |  
                                                                                            | net secondary production | amt of emergy organism consumes/uses for growth |  
                                                                                            | assimilation | amt of energy organism uses for above+respiration |  
                                                                                            | energy transfer only 10% efficient |  
                                                                                            | movement corridors | connect fragmented habitats |  
                                                                                            | water cycle | enter by drinking/absorption, leave by evaporation, transpiration, peeing |  
                                                                                            | carbon | enter plants via photosynthesis, return by respiration, volcanoes, fossil fuels |  
                                                                                            | nitrogen fixation | conversion of unusable nitrogen to NH4 and NO3 |  
                                                                                            | assimilation | uptake of NH4 and NO3 by plants |  
                                                                                            | ammonification | N2 to NH3 to NH4 |  
                                                                                            | nitrification | NH4 to NO2 to NO3 |  
                                                                                            | denitrification | NO3 to N2 |  
                                                                                            | phosphorus cycle | rock weathering adds PO4(-3) to soil, to plants, biomolecules to animals |  
                                                                                            | decomposition/excretion | phosphate returned to soil/water |  
                                                                                            | ecosystem services | natural ecosystems help sustain human life | purification, detox, nutrient cycling, moderating weather, organism interactions |  | 
            
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