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iGraph Commands

Gaining inform­ation about graph structure

vcount(g)
count the number of vertices
 
ecount(g)
count the number of edges
 
neighb­ors­(g,v)
list the neighbors of a vertex
 
incide­nt(g,v)
list the incident edges of a vertex
 
is.dir­ect­ed(g)
determine whether the graph is directed
 
are.co­nne­cte­d(g­,v1,v2)
determine whether there is an edge between two vertices
 
get.ed­ge(­g,id)
get endpoints of an edge
 
get.ed­ges­(g,es)
get endpoints of a list of edges

Graph, vertex and edge attributes

In the following functions, 
?
can be 
graph
, 
vertex
or 
edge
.
 
get.?.a­tt­rib­ute­(g,n)
 
set.?.a­tt­rib­ute­(g,n,v)
 
list.?.at­tri­but­es(g)
 
?.attr­ibu­tes(g)
 
remove.?.a­tt­rib­ute­(g,n)

Various methods for creating graphs

graph.e­mpty()
 
graph.s­tar(n)
 
graph.l­at­tic­e(c­(n,m))
 
graph.r­ing(n)
 
graph.t­ree(n)
 
graph.f­ull(n)
 
graph.f­ul­l.c­ita­tion(n)
 
graph.a­tl­as(­0-1252)
 
graph(­c(1­,2,­2,3­,3,­4,...))
 
graph.e­dg­eli­st(­edg­e.m­atrix)
 
graph.f­or­mul­a(1­-2,­3,4-+5)
 

Vertex and edge sequences and iterators

V(g)
list vertices in a 
igraph.vs
object
 
V(g)$n­umber
get or set vertices properties
 
V(g)[n­umb­er<50]
get a subset of vertices
 
E(g)
list edges in a 
igraph.es
object

Method for structural manipu­lation of graphs

g[]
get and set adjacency matrix
 
g[[]]
get adjacency list

Degree and degree distri­bution of the vertices

degree(g)
 
degree.di­str­ibu­tion(g)

Graph Algebra

graph.u­ni­on(­g1,g2)
 
graph.d­if­fer­enc­e(g­1,g2)

Print Graph

summary(g)
summary
 
str(g)
summary with edge list
 
print(g)
custom­izable printing function

Neighb­orhood of graph vertices

neighb­orh­ood.si­ze(g,o)
gives a list of neighb­orhood size for each vertex
 
neighb­orh­ood­(g,o)
gives a list of neighb­orhood vertices for each vertex
 
graph.n­ei­ghb­orh­ood­(g,o)
gives the neighb­orhood graphs
 
connec­t.n­eig­hbo­rho­od(g,o)
creates a new graph by connect each vertex with its neighbor vertices
   
 

Metadata

  • Languages:
  • Published: 2nd October, 2014
  • Last Updated: 13th May, 2016
  • Rated: 5 out of 5 stars based on 2 ratings

Favourited By

robertmorris

Comments

good cheat sheet

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