\documentclass[10pt,a4paper]{article} % Packages \usepackage{fancyhdr} % For header and footer \usepackage{multicol} % Allows multicols in tables \usepackage{tabularx} % Intelligent column widths \usepackage{tabulary} % Used in header and footer \usepackage{hhline} % Border under tables \usepackage{graphicx} % For images \usepackage{xcolor} % For hex colours %\usepackage[utf8x]{inputenc} % For unicode character support \usepackage[T1]{fontenc} % Without this we get weird character replacements \usepackage{colortbl} % For coloured tables \usepackage{setspace} % For line height \usepackage{lastpage} % Needed for total page number \usepackage{seqsplit} % Splits long words. %\usepackage{opensans} % Can't make this work so far. Shame. Would be lovely. \usepackage[normalem]{ulem} % For underlining links % Most of the following are not required for the majority % of cheat sheets but are needed for some symbol support. \usepackage{amsmath} % Symbols \usepackage{MnSymbol} % Symbols \usepackage{wasysym} % Symbols %\usepackage[english,german,french,spanish,italian]{babel} % Languages % Document Info \author{sunshine23} \pdfinfo{ /Title (biochem-ch21.pdf) /Creator (Cheatography) /Author (sunshine23) /Subject (BIOCHEM Ch21 Cheat Sheet) } % Lengths and widths \addtolength{\textwidth}{6cm} \addtolength{\textheight}{-1cm} \addtolength{\hoffset}{-3cm} \addtolength{\voffset}{-2cm} \setlength{\tabcolsep}{0.2cm} % Space between columns \setlength{\headsep}{-12pt} % Reduce space between header and content \setlength{\headheight}{85pt} % If less, LaTeX automatically increases it \renewcommand{\footrulewidth}{0pt} % Remove footer line \renewcommand{\headrulewidth}{0pt} % Remove header line \renewcommand{\seqinsert}{\ifmmode\allowbreak\else\-\fi} % Hyphens in seqsplit % This two commands together give roughly % the right line height in the tables \renewcommand{\arraystretch}{1.3} \onehalfspacing % Commands \newcommand{\SetRowColor}[1]{\noalign{\gdef\RowColorName{#1}}\rowcolor{\RowColorName}} % Shortcut for row colour \newcommand{\mymulticolumn}[3]{\multicolumn{#1}{>{\columncolor{\RowColorName}}#2}{#3}} % For coloured multi-cols \newcolumntype{x}[1]{>{\raggedright}p{#1}} % New column types for ragged-right paragraph columns \newcommand{\tn}{\tabularnewline} % Required as custom column type in use % Font and Colours \definecolor{HeadBackground}{HTML}{333333} \definecolor{FootBackground}{HTML}{666666} \definecolor{TextColor}{HTML}{333333} \definecolor{DarkBackground}{HTML}{4DD9E3} \definecolor{LightBackground}{HTML}{E8FAFB} \renewcommand{\familydefault}{\sfdefault} \color{TextColor} % Header and Footer \pagestyle{fancy} \fancyhead{} % Set header to blank \fancyfoot{} % Set footer to blank \fancyhead[L]{ \noindent \begin{multicols}{3} \begin{tabulary}{5.8cm}{C} \SetRowColor{DarkBackground} \vspace{-7pt} {\parbox{\dimexpr\textwidth-2\fboxsep\relax}{\noindent \hspace*{-6pt}\includegraphics[width=5.8cm]{/web/www.cheatography.com/public/images/cheatography_logo.pdf}} } \end{tabulary} \columnbreak \begin{tabulary}{11cm}{L} \vspace{-2pt}\large{\bf{\textcolor{DarkBackground}{\textrm{BIOCHEM Ch21 Cheat Sheet}}}} \\ \normalsize{by \textcolor{DarkBackground}{sunshine23} via \textcolor{DarkBackground}{\uline{cheatography.com/71941/cs/18242/}}} \end{tabulary} \end{multicols}} \fancyfoot[L]{ \footnotesize \noindent \begin{multicols}{3} \begin{tabulary}{5.8cm}{LL} \SetRowColor{FootBackground} \mymulticolumn{2}{p{5.377cm}}{\bf\textcolor{white}{Cheatographer}} \\ \vspace{-2pt}sunshine23 \\ \uline{cheatography.com/sunshine23} \\ \end{tabulary} \vfill \columnbreak \begin{tabulary}{5.8cm}{L} \SetRowColor{FootBackground} \mymulticolumn{1}{p{5.377cm}}{\bf\textcolor{white}{Cheat Sheet}} \\ \vspace{-2pt}Published 12th December, 2018.\\ Updated 12th December, 2018.\\ Page {\thepage} of \pageref{LastPage}. \end{tabulary} \vfill \columnbreak \begin{tabulary}{5.8cm}{L} \SetRowColor{FootBackground} \mymulticolumn{1}{p{5.377cm}}{\bf\textcolor{white}{Sponsor}} \\ \SetRowColor{white} \vspace{-5pt} %\includegraphics[width=48px,height=48px]{dave.jpeg} Measure your website readability!\\ www.readability-score.com \end{tabulary} \end{multicols}} \begin{document} \raggedright \raggedcolumns % Set font size to small. Switch to any value % from this page to resize cheat sheet text: % www.emerson.emory.edu/services/latex/latex_169.html \footnotesize % Small font. \begin{multicols*}{3} \begin{tabularx}{5.377cm}{X} \SetRowColor{DarkBackground} \mymulticolumn{1}{x{5.377cm}}{\bf\textcolor{white}{BASES OF NUCLEIC ACIDS}} \tn \SetRowColor{LightBackground} \mymulticolumn{1}{p{5.377cm}}{\vspace{1px}\centerline{\includegraphics[width=5.1cm]{/web/www.cheatography.com/public/uploads/sunshine23_1544562728_Screen Shot 2018-12-11 at 4.10.23 PM.png}}} \tn \hhline{>{\arrayrulecolor{DarkBackground}}-} \SetRowColor{LightBackground} \mymulticolumn{1}{x{5.377cm}}{- PYRIMIDINE: single ring with two nitrogen atoms \newline - PURINE: two rings each with two nitrogen atoms. \newline \newline BASIC because the nitrogen atoms are H+ acceptors.} \tn \hhline{>{\arrayrulecolor{DarkBackground}}-} \end{tabularx} \par\addvspace{1.3em} \begin{tabularx}{5.377cm}{X} \SetRowColor{DarkBackground} \mymulticolumn{1}{x{5.377cm}}{\bf\textcolor{white}{BONDS}} \tn \SetRowColor{LightBackground} \mymulticolumn{1}{p{5.377cm}}{\vspace{1px}\centerline{\includegraphics[width=5.1cm]{/web/www.cheatography.com/public/uploads/sunshine23_1544639908_1514-1530020379880.png}}} \tn \hhline{>{\arrayrulecolor{DarkBackground}}-} \SetRowColor{LightBackground} \mymulticolumn{1}{x{5.377cm}}{- PHOSPHODIESTER BOND: the bond between the 3' OH of a sugar (nucleotide) and a phosphate group attached to the 5' C of another sugar. \newline \newline - HYDROGEN BOND: Weak, noncovalent linkages with favorable electrostatic interactions. \newline \newline - N-GLYCOSIDIC BOND: In DNA, refers to the N-C linkage between the 9' N of purine bases or 1' N of pyrimidine bases and the 1' C of the sugar group.} \tn \hhline{>{\arrayrulecolor{DarkBackground}}-} \end{tabularx} \par\addvspace{1.3em} \begin{tabularx}{5.377cm}{X} \SetRowColor{DarkBackground} \mymulticolumn{1}{x{5.377cm}}{\bf\textcolor{white}{TYPES OF RNA}} \tn \SetRowColor{LightBackground} \mymulticolumn{1}{p{5.377cm}}{\vspace{1px}\centerline{\includegraphics[width=5.1cm]{/web/www.cheatography.com/public/uploads/sunshine23_1544641798_Screen Shot 2018-12-12 at 2.07.41 PM.png}}} \tn \hhline{>{\arrayrulecolor{DarkBackground}}-} \SetRowColor{LightBackground} \mymulticolumn{1}{x{5.377cm}}{There are 3 major types of RNA: \newline - messenger RNA (mRNA - 5\%): carries genetic info copied from DNA to the ribosomes -{}-\textgreater{} TRANSCRIPTION phase. \newline \newline - transfer RNA (tRNA - 15\%): translates the genetic info in mRNA into the AA sequence for the protein -{}-\textgreater{} TRANSLATION phase. \newline \newline -ribosomal RNA (rRNA - 80\%): most abundant type of RNA; combined with proteins to form ribosomes.} \tn \hhline{>{\arrayrulecolor{DarkBackground}}-} \end{tabularx} \par\addvspace{1.3em} \begin{tabularx}{5.377cm}{X} \SetRowColor{DarkBackground} \mymulticolumn{1}{x{5.377cm}}{\bf\textcolor{white}{RNA \& TRANSCRIPTION}} \tn \SetRowColor{white} \mymulticolumn{1}{x{5.377cm}}{The three types of RNA differ by function in the cell: \newline % Row Count 2 (+ 2) - ribosomal RNA makes up most of the structure of the ribosomes, \newline % Row Count 4 (+ 2) - messenger RNA carries genetic information from the DNA to the ribosomes \newline % Row Count 6 (+ 2) -transfer RNA places the correct amino acids in a growing peptide chain. \newline % Row Count 8 (+ 2) TRANSCRIPTION is the process by which RNA polymerase produces mRNA from one strand of DNA. \newline % Row Count 10 (+ 2) - Transcription factors at the promoter region bind RNA polymerase to DNA, which activates the transcription of a gene. \newline % Row Count 13 (+ 3) - The bases in the mRNA are complementary to the DNA, except A \newline % Row Count 15 (+ 2) in DNA is paired with U in RNA. \newline % Row Count 16 (+ 1) - The production of mRNA occurs when certain proteins are needed \newline % Row Count 18 (+ 2) in the cell.% Row Count 19 (+ 1) } \tn \hhline{>{\arrayrulecolor{DarkBackground}}-} \end{tabularx} \par\addvspace{1.3em} \begin{tabularx}{5.377cm}{X} \SetRowColor{DarkBackground} \mymulticolumn{1}{x{5.377cm}}{\bf\textcolor{white}{Genetic Code \& Protein Synthesis}} \tn \SetRowColor{white} \mymulticolumn{1}{x{5.377cm}}{The genetic code consists of a series of codons (sequences of 3 bases that specify the order for the amino acids in a protein). \newline % Row Count 3 (+ 3) - AUG codons signals the start of transcription \newline % Row Count 4 (+ 1) - codons UAG, UGA, and UAA signal it to stop the transcription. \newline % Row Count 6 (+ 2) Proteins are synthesized at the ribosomes in a translation process that includes 3 steps: initiation, chain elongation, and termination. \newline % Row Count 9 (+ 3) - During TRANSLATION, tRNAs bring the appropriate amino acids to the ribosome, and peptide bonds form to join the amino acids in a peptide chain. \newline % Row Count 12 (+ 3) - When the polypeptide is released, it takes on its secondary and tertiary structures and becomes a functional protein in the cell.% Row Count 15 (+ 3) } \tn \hhline{>{\arrayrulecolor{DarkBackground}}-} \end{tabularx} \par\addvspace{1.3em} \begin{tabularx}{5.377cm}{X} \SetRowColor{DarkBackground} \mymulticolumn{1}{x{5.377cm}}{\bf\textcolor{white}{PYRAMIDINE \& PURINE BASES}} \tn \SetRowColor{LightBackground} \mymulticolumn{1}{p{5.377cm}}{\vspace{1px}\centerline{\includegraphics[width=5.1cm]{/web/www.cheatography.com/public/uploads/sunshine23_1544563256_Screen Shot 2018-12-11 at 4.13.49 PM.png}}} \tn \hhline{>{\arrayrulecolor{DarkBackground}}-} \SetRowColor{LightBackground} \mymulticolumn{1}{x{5.377cm}}{DNA contains the bases A, G, C, and T \newline RNA contains A, G, C, and U.} \tn \hhline{>{\arrayrulecolor{DarkBackground}}-} \end{tabularx} \par\addvspace{1.3em} \begin{tabularx}{5.377cm}{X} \SetRowColor{DarkBackground} \mymulticolumn{1}{x{5.377cm}}{\bf\textcolor{white}{Base Pairs}} \tn \SetRowColor{white} \mymulticolumn{1}{x{5.377cm}}{Image could not be loaded.} \tn \hhline{>{\arrayrulecolor{DarkBackground}}-} \SetRowColor{LightBackground} \mymulticolumn{1}{x{5.377cm}}{-Template Strand (ANTI-SENSE): info that codes for genes; contains anti-codons. \newline \newline -Coding Strand (SENSE): complementary to anti-sense; contains codons (decoded by tRNA, which interacts with ribosome-bound mRNA). \newline \newline -mRNA: made from template strand; has the same info as coding strand except T is replaced by U.} \tn \hhline{>{\arrayrulecolor{DarkBackground}}-} \end{tabularx} \par\addvspace{1.3em} \begin{tabularx}{5.377cm}{X} \SetRowColor{DarkBackground} \mymulticolumn{1}{x{5.377cm}}{\bf\textcolor{white}{PROTEIN SYNTHESIS}} \tn \SetRowColor{LightBackground} \mymulticolumn{1}{p{5.377cm}}{\vspace{1px}\centerline{\includegraphics[width=5.1cm]{/web/www.cheatography.com/public/uploads/sunshine23_1544642215_Screen Shot 2018-12-12 at 2.14.19 PM.png}}} \tn \hhline{>{\arrayrulecolor{DarkBackground}}-} \end{tabularx} \par\addvspace{1.3em} \begin{tabularx}{5.377cm}{X} \SetRowColor{DarkBackground} \mymulticolumn{1}{x{5.377cm}}{\bf\textcolor{white}{TYPES OF MUTATIONS}} \tn \SetRowColor{LightBackground} \mymulticolumn{1}{p{5.377cm}}{\vspace{1px}\centerline{\includegraphics[width=5.1cm]{/web/www.cheatography.com/public/uploads/sunshine23_1544641233_Screen Shot 2018-12-12 at 1.08.13 PM.png}}} \tn \hhline{>{\arrayrulecolor{DarkBackground}}-} \SetRowColor{LightBackground} \mymulticolumn{1}{x{5.377cm}}{- POINT MUTATION: the replacement of one base in the template strand of DNA with another, causing a change in AA. \newline \newline - SILENT MUTATION: when a point mutation does not change the amino acid. \newline \newline - DELETION MUTATION: a base is deleted from codon, changing all that follow and producing a different sequence of AA. \newline \newline - INSERTION MUTATION: a base is inserted into the normal order of bases, changing all the codons that follow and producing a different sequence of AA.} \tn \hhline{>{\arrayrulecolor{DarkBackground}}-} \end{tabularx} \par\addvspace{1.3em} \begin{tabularx}{5.377cm}{X} \SetRowColor{DarkBackground} \mymulticolumn{1}{x{5.377cm}}{\bf\textcolor{white}{REVERSE TRANSCRIPTION}} \tn \SetRowColor{LightBackground} \mymulticolumn{1}{p{5.377cm}}{\vspace{1px}\centerline{\includegraphics[width=5.1cm]{/web/www.cheatography.com/public/uploads/sunshine23_1544644894_Screen Shot 2018-12-12 at 3.00.14 PM.png}}} \tn \hhline{>{\arrayrulecolor{DarkBackground}}-} \SetRowColor{LightBackground} \mymulticolumn{1}{x{5.377cm}}{In reverse transcription: \newline - a retrovirus, which contains viral RNA but no viral DNA, enters a cell. \newline - the viral RNA uses reverse transcriptase to produce a viral DNA strand. \newline - the viral DNA strand forms a complementary DNA strand. \newline - the new DNA uses the nucleotides and enzymes in the host cell to synthesize new virus particles.} \tn \hhline{>{\arrayrulecolor{DarkBackground}}-} \end{tabularx} \par\addvspace{1.3em} \begin{tabularx}{5.377cm}{X} \SetRowColor{DarkBackground} \mymulticolumn{1}{x{5.377cm}}{\bf\textcolor{white}{NUCLEOSIDES VS NUCLEOTIDES}} \tn \SetRowColor{LightBackground} \mymulticolumn{1}{p{5.377cm}}{\vspace{1px}\centerline{\includegraphics[width=5.1cm]{/web/www.cheatography.com/public/uploads/sunshine23_1544564244_Screen Shot 2018-12-11 at 4.30.45 PM.png}}} \tn \hhline{>{\arrayrulecolor{DarkBackground}}-} \SetRowColor{LightBackground} \mymulticolumn{1}{x{5.377cm}}{NucleoSide = Base + Sugar \newline NucleoTide = Base + Sugar + Phosphate group(s) \newline \newline In nucleoside, the nitrogen atom of the base is connected by a b-N-glycosidic bond to the C1 of the sugar. \newline \newline A nucleotide forms a phosphoester bond with the C5 OH group of the sugar.} \tn \hhline{>{\arrayrulecolor{DarkBackground}}-} \end{tabularx} \par\addvspace{1.3em} \begin{tabularx}{5.377cm}{X} \SetRowColor{DarkBackground} \mymulticolumn{1}{x{5.377cm}}{\bf\textcolor{white}{SUGAR BASES}} \tn \SetRowColor{LightBackground} \mymulticolumn{1}{p{5.377cm}}{\vspace{1px}\centerline{\includegraphics[width=5.1cm]{/web/www.cheatography.com/public/uploads/sunshine23_1544563499_Screen Shot 2018-12-11 at 4.22.01 PM.png}}} \tn \hhline{>{\arrayrulecolor{DarkBackground}}-} \SetRowColor{LightBackground} \mymulticolumn{1}{x{5.377cm}}{Pentose sugars in Nucleic Acids \newline - RNA: ribose \newline - DNA: deoxyribose; no hydroxyl group in C2} \tn \hhline{>{\arrayrulecolor{DarkBackground}}-} \end{tabularx} \par\addvspace{1.3em} \begin{tabularx}{5.377cm}{X} \SetRowColor{DarkBackground} \mymulticolumn{1}{x{5.377cm}}{\bf\textcolor{white}{DNA REPLICATION}} \tn \SetRowColor{LightBackground} \mymulticolumn{1}{p{5.377cm}}{\vspace{1px}\centerline{\includegraphics[width=5.1cm]{/web/www.cheatography.com/public/uploads/sunshine23_1544641549_Screen Shot 2018-12-12 at 2.04.45 PM.png}}} \tn \hhline{>{\arrayrulecolor{DarkBackground}}-} \SetRowColor{LightBackground} \mymulticolumn{1}{x{5.377cm}}{-helicase unwinds the parent DNA at several sections. \newline \newline -DNA polymerase catalyzes the replication process at each of the open DNA sections called replication forks. \newline \newline -polymerase moves in the 3′–5′direction, catalyzing the formation of new phosphodiester linkages. \newline \newline -lagging strand (growing in the 5′–3′ direction) is synthesized in short sections called Okazaki fragments. \newline \newline -DNA ligase joins the Okazaki fragments.} \tn \hhline{>{\arrayrulecolor{DarkBackground}}-} \end{tabularx} \par\addvspace{1.3em} \begin{tabularx}{5.377cm}{X} \SetRowColor{DarkBackground} \mymulticolumn{1}{x{5.377cm}}{\bf\textcolor{white}{DNA Replication}} \tn \SetRowColor{white} \mymulticolumn{1}{x{5.377cm}}{- During DNA replication, DNA polymerase makes new DNA strands along each of the original DNA strands that serve as templates. \newline % Row Count 3 (+ 3) - Complementary base pairing ensures the correct pairing of bases to give identical copies of the original DNA.% Row Count 6 (+ 3) } \tn \hhline{>{\arrayrulecolor{DarkBackground}}-} \end{tabularx} \par\addvspace{1.3em} \begin{tabularx}{5.377cm}{X} \SetRowColor{DarkBackground} \mymulticolumn{1}{x{5.377cm}}{\bf\textcolor{white}{RETRO VIRUS}} \tn \SetRowColor{LightBackground} \mymulticolumn{1}{p{5.377cm}}{\vspace{1px}\centerline{\includegraphics[width=5.1cm]{/web/www.cheatography.com/public/uploads/sunshine23_1544642355_Screen Shot 2018-12-12 at 2.17.56 PM.png}}} \tn \hhline{>{\arrayrulecolor{DarkBackground}}-} \SetRowColor{LightBackground} \mymulticolumn{1}{x{5.377cm}}{After a retrovirus injects its viral RNA into a cell, it forms a DNA strand by reverse transcription. The single-stranded DNA forms a double-stranded DNA called a provirus, which is incorporated into the host cell DNA. When the cell replicates, the provirus produces the viral RNA needed to produce more virus \newline particles.} \tn \hhline{>{\arrayrulecolor{DarkBackground}}-} \end{tabularx} \par\addvspace{1.3em} % That's all folks \end{multicols*} \end{document}