\documentclass[10pt,a4paper]{article} % Packages \usepackage{fancyhdr} % For header and footer \usepackage{multicol} % Allows multicols in tables \usepackage{tabularx} % Intelligent column widths \usepackage{tabulary} % Used in header and footer \usepackage{hhline} % Border under tables \usepackage{graphicx} % For images \usepackage{xcolor} % For hex colours %\usepackage[utf8x]{inputenc} % For unicode character support \usepackage[T1]{fontenc} % Without this we get weird character replacements \usepackage{colortbl} % For coloured tables \usepackage{setspace} % For line height \usepackage{lastpage} % Needed for total page number \usepackage{seqsplit} % Splits long words. %\usepackage{opensans} % Can't make this work so far. Shame. Would be lovely. \usepackage[normalem]{ulem} % For underlining links % Most of the following are not required for the majority % of cheat sheets but are needed for some symbol support. \usepackage{amsmath} % Symbols \usepackage{MnSymbol} % Symbols \usepackage{wasysym} % Symbols %\usepackage[english,german,french,spanish,italian]{babel} % Languages % Document Info \author{kmz\_2022} \pdfinfo{ /Title (ap-biology-unit-6.pdf) /Creator (Cheatography) /Author (kmz\_2022) /Subject (AP Biology: Unit 6 Cheat Sheet) } % Lengths and widths \addtolength{\textwidth}{6cm} \addtolength{\textheight}{-1cm} \addtolength{\hoffset}{-3cm} \addtolength{\voffset}{-2cm} \setlength{\tabcolsep}{0.2cm} % Space between columns \setlength{\headsep}{-12pt} % Reduce space between header and content \setlength{\headheight}{85pt} % If less, LaTeX automatically increases it \renewcommand{\footrulewidth}{0pt} % Remove footer line \renewcommand{\headrulewidth}{0pt} % Remove header line \renewcommand{\seqinsert}{\ifmmode\allowbreak\else\-\fi} % Hyphens in seqsplit % This two commands together give roughly % the right line height in the tables \renewcommand{\arraystretch}{1.3} \onehalfspacing % Commands \newcommand{\SetRowColor}[1]{\noalign{\gdef\RowColorName{#1}}\rowcolor{\RowColorName}} % Shortcut for row colour \newcommand{\mymulticolumn}[3]{\multicolumn{#1}{>{\columncolor{\RowColorName}}#2}{#3}} % For coloured multi-cols \newcolumntype{x}[1]{>{\raggedright}p{#1}} % New column types for ragged-right paragraph columns \newcommand{\tn}{\tabularnewline} % Required as custom column type in use % Font and Colours \definecolor{HeadBackground}{HTML}{333333} \definecolor{FootBackground}{HTML}{666666} \definecolor{TextColor}{HTML}{333333} \definecolor{DarkBackground}{HTML}{0D85FC} \definecolor{LightBackground}{HTML}{EFF7FE} \renewcommand{\familydefault}{\sfdefault} \color{TextColor} % Header and Footer \pagestyle{fancy} \fancyhead{} % Set header to blank \fancyfoot{} % Set footer to blank \fancyhead[L]{ \noindent \begin{multicols}{3} \begin{tabulary}{5.8cm}{C} \SetRowColor{DarkBackground} \vspace{-7pt} {\parbox{\dimexpr\textwidth-2\fboxsep\relax}{\noindent \hspace*{-6pt}\includegraphics[width=5.8cm]{/web/www.cheatography.com/public/images/cheatography_logo.pdf}} } \end{tabulary} \columnbreak \begin{tabulary}{11cm}{L} \vspace{-2pt}\large{\bf{\textcolor{DarkBackground}{\textrm{AP Biology: Unit 6 Cheat Sheet}}}} \\ \normalsize{by \textcolor{DarkBackground}{kmz\_2022} via \textcolor{DarkBackground}{\uline{cheatography.com/145729/cs/31719/}}} \end{tabulary} \end{multicols}} \fancyfoot[L]{ \footnotesize \noindent \begin{multicols}{3} \begin{tabulary}{5.8cm}{LL} \SetRowColor{FootBackground} \mymulticolumn{2}{p{5.377cm}}{\bf\textcolor{white}{Cheatographer}} \\ \vspace{-2pt}kmz\_2022 \\ \uline{cheatography.com/kmz-2022} \\ \end{tabulary} \vfill \columnbreak \begin{tabulary}{5.8cm}{L} \SetRowColor{FootBackground} \mymulticolumn{1}{p{5.377cm}}{\bf\textcolor{white}{Cheat Sheet}} \\ \vspace{-2pt}Not Yet Published.\\ Updated 18th April, 2022.\\ Page {\thepage} of \pageref{LastPage}. \end{tabulary} \vfill \columnbreak \begin{tabulary}{5.8cm}{L} \SetRowColor{FootBackground} \mymulticolumn{1}{p{5.377cm}}{\bf\textcolor{white}{Sponsor}} \\ \SetRowColor{white} \vspace{-5pt} %\includegraphics[width=48px,height=48px]{dave.jpeg} Measure your website readability!\\ www.readability-score.com \end{tabulary} \end{multicols}} \begin{document} \raggedright \raggedcolumns % Set font size to small. Switch to any value % from this page to resize cheat sheet text: % www.emerson.emory.edu/services/latex/latex_169.html \footnotesize % Small font. \begin{multicols*}{2} \begin{tabularx}{8.4cm}{x{4.32 cm} x{3.68 cm} } \SetRowColor{DarkBackground} \mymulticolumn{2}{x{8.4cm}}{\bf\textcolor{white}{Early Genetics}} \tn % Row 0 \SetRowColor{LightBackground} - biochemical group first thought to contain genetic information = & proteins \tn % Row Count 4 (+ 4) % Row 1 \SetRowColor{white} \{\{bb=1\}\}\{\{bl=1\}\}\{\{bt=1\}\}{\bf{Griffith bacterium experiment\textasciitilde{}}} & \{\{bt=1\}\}\{\{br=1\}\}\{\{bb=1\}\} \tn % Row Count 7 (+ 3) % Row 2 \SetRowColor{LightBackground} \{\{bl=1\}\}smooth strain (S) & outer capsule; pathogenic\{\{br=1\}\} \tn % Row Count 9 (+ 2) % Row 3 \SetRowColor{white} \{\{bl=1\}\}rough strain (R) & NO capsule; NOT pathogenic\{\{br=1\}\} \tn % Row Count 11 (+ 2) % Row 4 \SetRowColor{LightBackground} \{\{bl=1\}\}{\emph{Conclusion\textasciitilde{}}} & \{\{br=1\}\} \tn % Row Count 12 (+ 1) % Row 5 \SetRowColor{white} \{\{bl=1\}\}R cells combined w/ killed S cells transformed into living S cells & \{\{br=1\}\} \tn % Row Count 16 (+ 4) % Row 6 \SetRowColor{LightBackground} \{\{bb=1\}\}\{\{bl=1\}\}\{\{bt=1\}\}{\bf{Avery bacterium experiment\textasciitilde{}}} & \{\{bt=1\}\}\{\{br=1\}\}\{\{bb=1\}\} \tn % Row Count 19 (+ 3) % Row 7 \SetRowColor{white} \{\{bl=1\}\}- deactivated parts of dead S cells to find what transformed the cells & \{\{br=1\}\} \tn % Row Count 23 (+ 4) % Row 8 \SetRowColor{LightBackground} \{\{bl=1\}\}{\emph{Conclusion\textasciitilde{}}} & \{\{br=1\}\} \tn % Row Count 24 (+ 1) % Row 9 \SetRowColor{white} \{\{bl=1\}\}DNA transforms the bacteria & \{\{br=1\}\} \tn % Row Count 26 (+ 2) % Row 10 \SetRowColor{LightBackground} \{\{bb=1\}\}\{\{bl=1\}\}\{\{bt=1\}\}{\bf{Hershey \& Chase DNA experiment\textasciitilde{}}} & \{\{bt=1\}\}\{\{br=1\}\}\{\{bb=1\}\} \tn % Row Count 29 (+ 3) % Row 11 \SetRowColor{white} \{\{bl=1\}\}phages reproduced in presence of DNA (not proteins) & \{\{br=1\}\} \tn % Row Count 32 (+ 3) \end{tabularx} \par\addvspace{1.3em} \vfill \columnbreak \begin{tabularx}{8.4cm}{x{4.32 cm} x{3.68 cm} } \SetRowColor{DarkBackground} \mymulticolumn{2}{x{8.4cm}}{\bf\textcolor{white}{Early Genetics (cont)}} \tn % Row 12 \SetRowColor{LightBackground} \{\{bl=1\}\}{\emph{Conclusion\textasciitilde{}}} & \{\{br=1\}\} \tn % Row Count 1 (+ 1) % Row 13 \SetRowColor{white} \{\{bl=1\}\}DNA is the genetic material & \{\{br=1\}\} \tn % Row Count 3 (+ 2) % Row 14 \SetRowColor{LightBackground} \{\{bb=1\}\}\{\{bl=1\}\}\{\{bt=1\}\}{\bf{Chargaff nucleotide experiment\textasciitilde{}}} & \{\{bt=1\}\}\{\{br=1\}\}\{\{bb=1\}\} \tn % Row Count 6 (+ 3) % Row 15 \SetRowColor{white} \{\{bl=1\}\}{\emph{Conclusions\textasciitilde{}}} & \{\{br=1\}\} \tn % Row Count 8 (+ 2) % Row 16 \SetRowColor{LightBackground} \{\{bl=1\}\}base composition varies between each species (diff. \% nucleotides) & \{\{br=1\}\} \tn % Row Count 12 (+ 4) % Row 17 \SetRowColor{white} \{\{bl=1\}\}\{\{bb=1\}\}\# of nitrogenous bases equaled (A=T G=C) & \{\{bb=1\}\}\{\{br=1\}\} \tn % Row Count 15 (+ 3) \hhline{>{\arrayrulecolor{DarkBackground}}--} \end{tabularx} \par\addvspace{1.3em} \begin{tabularx}{8.4cm}{x{4.24 cm} x{3.76 cm} } \SetRowColor{DarkBackground} \mymulticolumn{2}{x{8.4cm}}{\bf\textcolor{white}{DNA Structure}} \tn % Row 0 \SetRowColor{LightBackground} - x-ray crystallography images of DNA by: & Rosalind Franklin \tn % Row Count 2 (+ 2) % Row 1 \SetRowColor{white} \mymulticolumn{2}{x{8.4cm}}{↳ DNA is a helical shape} \tn % Row Count 3 (+ 1) % Row 2 \SetRowColor{LightBackground} - construction of the double helix model by: & Watson \& Crick \tn % Row Count 6 (+ 3) % Row 3 \SetRowColor{white} - purines (2 rings) & A \& G \tn % Row Count 7 (+ 1) % Row 4 \SetRowColor{LightBackground} - pyrimidines (1 ring) & T \& C \tn % Row Count 9 (+ 2) % Row 5 \SetRowColor{white} - A pairs with T by... & 2 H bonds \tn % Row Count 11 (+ 2) % Row 6 \SetRowColor{LightBackground} - C pairs with G by... & 3 H bonds \tn % Row Count 13 (+ 2) % Row 7 \SetRowColor{white} - base pairs present in 1 helix turn = & 10 \tn % Row Count 15 (+ 2) % Row 8 \SetRowColor{LightBackground} {\bf{antiparallel:}} & subunits run in opposite directions \tn % Row Count 17 (+ 2) \hhline{>{\arrayrulecolor{DarkBackground}}--} \end{tabularx} \par\addvspace{1.3em} \begin{tabularx}{8.4cm}{x{2.584 cm} x{2.508 cm} x{2.508 cm} } \SetRowColor{DarkBackground} \mymulticolumn{3}{x{8.4cm}}{\bf\textcolor{white}{DNA Replication Experiment}} \tn % Row 0 \SetRowColor{LightBackground} - experiment done by: & Meselson \& Stahl & \tn % Row Count 2 (+ 2) % Row 1 \SetRowColor{white} \mymulticolumn{3}{x{8.4cm}}{{\bf{{\emph{Prediction}}}}} \tn % Row Count 3 (+ 1) % Row 2 \SetRowColor{LightBackground} {\bf{replication style}} & {\bf{\# bands 1st rep.}} & {\bf{\# bands 2nd rep.}} \tn % Row Count 5 (+ 2) % Row 3 \SetRowColor{white} {\emph{conservative}} & 2 & 2 \tn % Row Count 7 (+ 2) % Row 4 \SetRowColor{LightBackground} {\emph{semiconservative}} & 1 & 2 \tn % Row Count 9 (+ 2) % Row 5 \SetRowColor{white} {\emph{dispersive}} & 1 & 1 \tn % Row Count 10 (+ 1) % Row 6 \SetRowColor{LightBackground} \mymulticolumn{3}{x{8.4cm}}{{\bf{{\emph{Results}}}}} \tn % Row Count 11 (+ 1) % Row 7 \SetRowColor{white} \# bands 1st rep. & 1 & \tn % Row Count 13 (+ 2) % Row 8 \SetRowColor{LightBackground} \# bands 2nd rep. & 2 & \tn % Row Count 15 (+ 2) % Row 9 \SetRowColor{white} conclusion = & \seqsplit{semiconservative} & \tn % Row Count 17 (+ 2) \hhline{>{\arrayrulecolor{DarkBackground}}---} \end{tabularx} \par\addvspace{1.3em} \begin{tabularx}{8.4cm}{x{4 cm} x{4 cm} } \SetRowColor{DarkBackground} \mymulticolumn{2}{x{8.4cm}}{\bf\textcolor{white}{Replication Process}} \tn % Row 0 \SetRowColor{LightBackground} {\bf{origin of replication:}} & site where the replication of DNA molecules begins \tn % Row Count 3 (+ 3) % Row 1 \SetRowColor{white} {\bf{ replication fork:}} & Y-shaped region on the replicating DNA molecule \tn % Row Count 6 (+ 3) % Row 2 \SetRowColor{LightBackground} \mymulticolumn{2}{x{8.4cm}}{{\bf{- E. coli}}} \tn % Row Count 7 (+ 1) % Row 3 \SetRowColor{white} \mymulticolumn{2}{x{8.4cm}}{↳ 1 replication origin} \tn % Row Count 8 (+ 1) % Row 4 \SetRowColor{LightBackground} \mymulticolumn{2}{x{8.4cm}}{↳ 500 nucleotides/sec} \tn % Row Count 9 (+ 1) % Row 5 \SetRowColor{white} \mymulticolumn{2}{x{8.4cm}}{{\bf{- human}}} \tn % Row Count 10 (+ 1) % Row 6 \SetRowColor{LightBackground} \mymulticolumn{2}{x{8.4cm}}{↳ 100s-1000s of replication origins} \tn % Row Count 11 (+ 1) % Row 7 \SetRowColor{white} \mymulticolumn{2}{x{8.4cm}}{↳ 50 nucleotides/sec} \tn % Row Count 12 (+ 1) % Row 8 \SetRowColor{LightBackground} \mymulticolumn{2}{x{8.4cm}}{{\bf{- 2 items required to start replication:}}} \tn % Row Count 13 (+ 1) % Row 9 \SetRowColor{white} 1. primer & 2. DNA template strand \tn % Row Count 15 (+ 2) % Row 10 \SetRowColor{LightBackground} \mymulticolumn{2}{x{8.4cm}}{{\bf{- how added nucleotides bring energy:}}} \tn % Row Count 16 (+ 1) % Row 11 \SetRowColor{white} \mymulticolumn{2}{x{8.4cm}}{↳ nucleotides carried by triphosphate} \tn % Row Count 17 (+ 1) % Row 12 \SetRowColor{LightBackground} \mymulticolumn{2}{x{8.4cm}}{↳ DNA polymerase catalyzes triphosphate} \tn % Row Count 18 (+ 1) % Row 13 \SetRowColor{white} \mymulticolumn{2}{x{8.4cm}}{↳ 2 phosphates are released} \tn % Row Count 19 (+ 1) % Row 14 \SetRowColor{LightBackground} - DNA polymerase adds to the... & 3' end \tn % Row Count 21 (+ 2) % Row 15 \SetRowColor{white} & (elongates from 5' to 3') \tn % Row Count 23 (+ 2) % Row 16 \SetRowColor{LightBackground} - lagging strand created from series of... & Okazaki fragments \tn % Row Count 26 (+ 3) \hhline{>{\arrayrulecolor{DarkBackground}}--} \end{tabularx} \par\addvspace{1.3em} \begin{tabularx}{8.4cm}{X} \SetRowColor{DarkBackground} \mymulticolumn{1}{x{8.4cm}}{\bf\textcolor{white}{Replication}} \tn \SetRowColor{LightBackground} \mymulticolumn{1}{p{8.4cm}}{\vspace{1px}\centerline{\includegraphics[width=5.1cm]{/web/www.cheatography.com/public/uploads/kmz-2022_1650137444_dna replication.png}}} \tn \hhline{>{\arrayrulecolor{DarkBackground}}-} \SetRowColor{LightBackground} \mymulticolumn{1}{x{8.4cm}}{{\bf{helicase:}} enzyme that unwinds \& separates the DNA strands \newline {\bf{topoisomerase:}} enzyme that breaks, swivels, \& rejoins the DNA \newline {\bf{primase:}} enzyme that synthesizes RNA primers \newline {\bf{primer:}} a short sequence of RNA that starts Okazaki fragments \newline {\bf{polymerase III:}} enzyme that adds nucleotides \newline {\bf{polymerase I:}} enzyme that removes the primer and replaces the nucleotides \newline {\bf{ligase:}} enzyme that forms the final bonds between the fragments and nucleotides} \tn \hhline{>{\arrayrulecolor{DarkBackground}}-} \end{tabularx} \par\addvspace{1.3em} \begin{tabularx}{8.4cm}{X} \SetRowColor{DarkBackground} \mymulticolumn{1}{x{8.4cm}}{\bf\textcolor{white}{Errors in DNA}} \tn % Row 0 \SetRowColor{LightBackground} \mymulticolumn{1}{x{8.4cm}}{{\bf{-}} as replication occurs, DNA polymerase finds \& corrects any mistakes -{}-{}-{}- {\emph{reducing the error rate}}} \tn % Row Count 3 (+ 3) % Row 1 \SetRowColor{white} \mymulticolumn{1}{x{8.4cm}}{{\bf{-}} change in the DNA nucleotide is {\emph{permanent/mutation}} when -{}-{}-{}- {\emph{the pair is replicated}}} \tn % Row Count 5 (+ 2) % Row 2 \SetRowColor{LightBackground} \mymulticolumn{1}{x{8.4cm}}{{\bf{-}} changes in DNA nucleotides due to...} \tn % Row Count 6 (+ 1) % Row 3 \SetRowColor{white} \mymulticolumn{1}{x{8.4cm}}{{\bf{↳}} {\bf{1.}} replication errors {\bf{2.}} chemicals {\bf{3.}} x-rays {\bf{4.}} spontaneously} \tn % Row Count 8 (+ 2) % Row 4 \SetRowColor{LightBackground} \mymulticolumn{1}{x{8.4cm}}{{\bf{telomeres:}} multiple repetitions of a short nucleotide sequence at the end of a chromosome} \tn % Row Count 10 (+ 2) % Row 5 \SetRowColor{white} \mymulticolumn{1}{x{8.4cm}}{{\bf{↳}} buffer zone to delay erosion of the genes as they get replicated} \tn % Row Count 12 (+ 2) % Row 6 \SetRowColor{LightBackground} \mymulticolumn{1}{x{8.4cm}}{{\bf{telomerase:}} enzyme that catalyzes the lengthening of telomeres (restore original length)} \tn % Row Count 14 (+ 2) % Row 7 \SetRowColor{white} \mymulticolumn{1}{x{8.4cm}}{{\bf{ histone:}} protein responsible for the first level of packing of chromosomes} \tn % Row Count 16 (+ 2) % Row 8 \SetRowColor{LightBackground} \mymulticolumn{1}{x{8.4cm}}{{\bf{nucleosome:}} segment of DNA wound around a protein unit} \tn % Row Count 18 (+ 2) \hhline{>{\arrayrulecolor{DarkBackground}}-} \end{tabularx} \par\addvspace{1.3em} \begin{tabularx}{8.4cm}{x{3.04 cm} x{4.96 cm} } \SetRowColor{DarkBackground} \mymulticolumn{2}{x{8.4cm}}{\bf\textcolor{white}{Gene Expression Background}} \tn % Row 0 \SetRowColor{LightBackground} {\bf{gene:}} & region of DNA expressed to produce a functional product (polypeptide/RNA molecule) \tn % Row Count 4 (+ 4) % Row 1 \SetRowColor{white} {\bf{ transcription:}} & synthesis of RNA from DNA template \tn % Row Count 6 (+ 2) % Row 2 \SetRowColor{LightBackground} {\bf{ translation:}} & synthesis of proteins from encoded mRNA \tn % Row Count 8 (+ 2) % Row 3 \SetRowColor{white} {\bf{ primary transcript:}} & initial RNA transcript from any gene (pre-mRNA) \tn % Row Count 10 (+ 2) % Row 4 \SetRowColor{LightBackground} {\bf{ codon:}} & 3 nucleotide sequence that specifies a particular amino acid \tn % Row Count 13 (+ 3) % Row 5 \SetRowColor{white} {\emph{- eukaryotes\textasciitilde{}}} & transcribe DNA to pre-mRNA \tn % Row Count 15 (+ 2) % Row 6 \SetRowColor{LightBackground} & from nucleus to ribosome \tn % Row Count 16 (+ 1) % Row 7 \SetRowColor{white} {\emph{- prokaryotes\textasciitilde{}}} & transcribe DNA to mRNA \tn % Row Count 18 (+ 2) % Row 8 \SetRowColor{LightBackground} & from cytoplasm to ribosome \tn % Row Count 20 (+ 2) \hhline{>{\arrayrulecolor{DarkBackground}}--} \end{tabularx} \par\addvspace{1.3em} \begin{tabularx}{8.4cm}{x{4 cm} x{4 cm} } \SetRowColor{DarkBackground} \mymulticolumn{2}{x{8.4cm}}{\bf\textcolor{white}{Transcription}} \tn % Row 0 \SetRowColor{LightBackground} {\bf{RNA polymerase:}} & enzyme that controls the transcription of DNA to RNA \tn % Row Count 3 (+ 3) % Row 1 \SetRowColor{white} \mymulticolumn{2}{x{8.4cm}}{{\bf{↳}} pries DNA strands apart \& joins the RNA nucleotides} \tn % Row Count 5 (+ 2) % Row 2 \SetRowColor{LightBackground} {\bf{↳}} moves 3' to 5' & (strand formed 5' to 3') \tn % Row Count 7 (+ 2) % Row 3 \SetRowColor{white} \mymulticolumn{2}{x{8.4cm}}{{\bf{↳}} attaches at the {\bf{promoter}}} \tn % Row Count 8 (+ 1) % Row 4 \SetRowColor{LightBackground} \mymulticolumn{2}{x{8.4cm}}{\{\{border=1\}\}\{\{ac\}\}{\bf{3 STAGES OF TRANSCRIPTION}}} \tn % Row Count 9 (+ 1) % Row 5 \SetRowColor{white} \mymulticolumn{2}{x{8.4cm}}{\{\{bb=1\}\}{\bf{{\emph{1. Initiation}}}}} \tn % Row Count 10 (+ 1) % Row 6 \SetRowColor{LightBackground} {\emph{- transcription factors:}} & protein that allows for polymerase to attach to DNA and transcribe \tn % Row Count 14 (+ 4) % Row 7 \SetRowColor{white} - 3 items to make up transcription initiation complex = & transcription factors, RNA polymerase, \& promoter \tn % Row Count 17 (+ 3) % Row 8 \SetRowColor{LightBackground} {\emph{- TATA box:}} & promoter that is 20-25 nucleotide from the starting point \tn % Row Count 20 (+ 3) % Row 9 \SetRowColor{white} \mymulticolumn{2}{x{8.4cm}}{* prokaryotes have NO transcription factors} \tn % Row Count 21 (+ 1) % Row 10 \SetRowColor{LightBackground} \mymulticolumn{2}{x{8.4cm}}{\{\{bb=1\}\}{\bf{{\emph{ 2. Elongation}}}}} \tn % Row Count 22 (+ 1) % Row 11 \SetRowColor{white} \mymulticolumn{2}{x{8.4cm}}{a. {\emph{10-20}} nucleotides exposed at a time} \tn % Row Count 23 (+ 1) % Row 12 \SetRowColor{LightBackground} \mymulticolumn{2}{x{8.4cm}}{b. nucleotides added to the {\emph{3' end}} of the RNA molecule} \tn % Row Count 25 (+ 2) % Row 13 \SetRowColor{white} - difference between RNA \& DNA nucleotides = & different sugars \tn % Row Count 28 (+ 3) % Row 14 \SetRowColor{LightBackground} - nucleotide RNA that DNA doesn't have... & {\emph{uracil}} \tn % Row Count 31 (+ 3) \end{tabularx} \par\addvspace{1.3em} \vfill \columnbreak \begin{tabularx}{8.4cm}{x{4 cm} x{4 cm} } \SetRowColor{DarkBackground} \mymulticolumn{2}{x{8.4cm}}{\bf\textcolor{white}{Transcription (cont)}} \tn % Row 15 \SetRowColor{LightBackground} - RNA \& DNA nucleotides held together by... & {\emph{hydrogen bonds}} \tn % Row Count 3 (+ 3) % Row 16 \SetRowColor{white} \mymulticolumn{2}{x{8.4cm}}{\{\{bb=1\}\}{\bf{{\emph{ 3. Termination}}}}} \tn % Row Count 4 (+ 1) % Row 17 \SetRowColor{LightBackground} \mymulticolumn{2}{x{8.4cm}}{a. transcription of the {\emph{polyadenylation signal}} adds nucleotides of AAUAAA to RNA} \tn % Row Count 6 (+ 2) % Row 18 \SetRowColor{white} \mymulticolumn{2}{x{8.4cm}}{b. protein cuts the pre-mRNA from polymerase = end of process!} \tn % Row Count 8 (+ 2) \hhline{>{\arrayrulecolor{DarkBackground}}--} \end{tabularx} \par\addvspace{1.3em} \begin{tabularx}{8.4cm}{X} \SetRowColor{DarkBackground} \mymulticolumn{1}{x{8.4cm}}{\bf\textcolor{white}{Transcription Diagram}} \tn \SetRowColor{LightBackground} \mymulticolumn{1}{p{8.4cm}}{\vspace{1px}\centerline{\includegraphics[width=5.1cm]{/web/www.cheatography.com/public/uploads/kmz-2022_1650309430_transcription.png}}} \tn \hhline{>{\arrayrulecolor{DarkBackground}}-} \end{tabularx} \par\addvspace{1.3em} \begin{tabularx}{8.4cm}{x{3.04 cm} x{4.96 cm} } \SetRowColor{DarkBackground} \mymulticolumn{2}{x{8.4cm}}{\bf\textcolor{white}{Pre-mRNA Modification}} \tn % Row 0 \SetRowColor{LightBackground} \mymulticolumn{2}{x{8.4cm}}{{\bf{-}} 5' end receives {\bf{5' cap}}} \tn % Row Count 1 (+ 1) % Row 1 \SetRowColor{white} \mymulticolumn{2}{x{8.4cm}}{{\bf{-}} 3' end receives {\bf{poly-A tail}} (enzyme adds 50-250 more A nucleotides)} \tn % Row Count 3 (+ 2) % Row 2 \SetRowColor{LightBackground} \mymulticolumn{2}{x{8.4cm}}{↳ {\emph{facilitate export}} from nucleus} \tn % Row Count 4 (+ 1) % Row 3 \SetRowColor{white} \mymulticolumn{2}{x{8.4cm}}{↳ {\emph{protect mRNA}} from hydrolytic enzymes} \tn % Row Count 5 (+ 1) % Row 4 \SetRowColor{LightBackground} \mymulticolumn{2}{x{8.4cm}}{↳ {\emph{help ribosomes attach}} to end of mRNA} \tn % Row Count 6 (+ 1) % Row 5 \SetRowColor{white} \{\{bt=1\}\}{\bf{RNA splicing:}} & \{\{bt=1\}\}process of removing RNA sections from pre-mRNA \tn % Row Count 9 (+ 3) % Row 6 \SetRowColor{LightBackground} {\emph{- introns:}} & noncoding sequences of pre-mRNA \tn % Row Count 11 (+ 2) % Row 7 \SetRowColor{white} {\emph{- exons:}} & sequences of pre-mRNA used for translation \tn % Row Count 13 (+ 2) % Row 8 \SetRowColor{LightBackground} \mymulticolumn{2}{x{8.4cm}}{{\bf{-}} 3 benefits of introns:} \tn % Row Count 14 (+ 1) % Row 9 \SetRowColor{white} \mymulticolumn{2}{x{8.4cm}}{↳ make many differnet polypeptides} \tn % Row Count 15 (+ 1) % Row 10 \SetRowColor{LightBackground} \mymulticolumn{2}{x{8.4cm}}{↳ discrete structural/functional regions} \tn % Row Count 16 (+ 1) % Row 11 \SetRowColor{white} \mymulticolumn{2}{x{8.4cm}}{↳ increase exon shuffling (new protein function)} \tn % Row Count 17 (+ 1) % Row 12 \SetRowColor{LightBackground} \{\{bt=1\}\}{\bf{ ribozymes:}} & \{\{bt=1\}\}RNA molecule that functions as an enzyme \tn % Row Count 19 (+ 2) % Row 13 \SetRowColor{white} & (create 3D structure; contain functional groups; H bond w/ DNA or RNA) \tn % Row Count 22 (+ 3) \hhline{>{\arrayrulecolor{DarkBackground}}--} \end{tabularx} \par\addvspace{1.3em} \begin{tabularx}{8.4cm}{X} \SetRowColor{DarkBackground} \mymulticolumn{1}{x{8.4cm}}{\bf\textcolor{white}{Ribosome Structure}} \tn \SetRowColor{LightBackground} \mymulticolumn{1}{p{8.4cm}}{\vspace{1px}\centerline{\includegraphics[width=5.1cm]{/web/www.cheatography.com/public/uploads/kmz-2022_1650314209_ribosome.jpg}}} \tn \hhline{>{\arrayrulecolor{DarkBackground}}-} \SetRowColor{LightBackground} \mymulticolumn{1}{x{8.4cm}}{{\bf{tRNA:}} transfers amino acids from cytoplasm to ribosomes (\& contain anticodon) \newline ↳ {\bf{anticodon:}} nucleotide triplet on tRNA molecule \newline ↳{\bf{'wobble':}} flexible base pairing at the 3rd codon position \newline - \# of amino acids used= {\emph{20}} \newline {\bf{-makeup of a ribosome:}} \newline - {\emph{large \& small subunit}}\textasciitilde{} made of proteins and rRNAs \newline (eukaryotes in nucleolus \& prokaryotes in cytoplasm)} \tn \hhline{>{\arrayrulecolor{DarkBackground}}-} \end{tabularx} \par\addvspace{1.3em} \begin{tabularx}{8.4cm}{x{3.76 cm} x{4.24 cm} } \SetRowColor{DarkBackground} \mymulticolumn{2}{x{8.4cm}}{\bf\textcolor{white}{Translation}} \tn % Row 0 \SetRowColor{LightBackground} \mymulticolumn{2}{x{8.4cm}}{\{\{border=1\}\}\{\{ac\}\}{\bf{{\emph{3 STAGES OF TRANSLATION}}}}} \tn % Row Count 1 (+ 1) % Row 1 \SetRowColor{white} \mymulticolumn{2}{x{8.4cm}}{\{\{bb=1\}\}{\bf{1. Initiation}}} \tn % Row Count 2 (+ 1) % Row 2 \SetRowColor{LightBackground} \mymulticolumn{2}{x{8.4cm}}{a. small subunit binds to mRNA \& initiator tRNA} \tn % Row Count 3 (+ 1) % Row 3 \SetRowColor{white} b. {\emph{ translation initiator complex=}} & attachment of large subunit (\& initiation factors) \tn % Row Count 6 (+ 3) % Row 4 \SetRowColor{LightBackground} \mymulticolumn{2}{x{8.4cm}}{\{\{bb=1\}\}{\bf{2. Elongation}}} \tn % Row Count 7 (+ 1) % Row 5 \SetRowColor{white} a. codon recognition- & anticodon of tRNA pairs w. mRNA codon \tn % Row Count 9 (+ 2) % Row 6 \SetRowColor{LightBackground} b. peptide bond formation- & removes polypeptide from tRNA by forming peptide bond \tn % Row Count 12 (+ 3) % Row 7 \SetRowColor{white} c. translocation- & empty tRNA released \tn % Row Count 13 (+ 1) % Row 8 \SetRowColor{LightBackground} \mymulticolumn{2}{x{8.4cm}}{* ribosome moves 5' to 3'} \tn % Row Count 14 (+ 1) % Row 9 \SetRowColor{white} \mymulticolumn{2}{x{8.4cm}}{\{\{bb=1\}\}{\bf{3. Termination}}} \tn % Row Count 15 (+ 1) % Row 10 \SetRowColor{LightBackground} a. stop codon- & "release" factor accepted \tn % Row Count 17 (+ 2) % Row 11 \SetRowColor{white} b. hydrolysis of bond- & freeing polypeptide \tn % Row Count 19 (+ 2) % Row 12 \SetRowColor{LightBackground} c. subunits dissociate- & mRNA can be used again \tn % Row Count 21 (+ 2) \hhline{>{\arrayrulecolor{DarkBackground}}--} \end{tabularx} \par\addvspace{1.3em} \begin{tabularx}{8.4cm}{X} \SetRowColor{DarkBackground} \mymulticolumn{1}{x{8.4cm}}{\bf\textcolor{white}{Translation Diagram}} \tn \SetRowColor{LightBackground} \mymulticolumn{1}{p{8.4cm}}{\vspace{1px}\centerline{\includegraphics[width=5.1cm]{/web/www.cheatography.com/public/uploads/kmz-2022_1650314765_translation.png}}} \tn \hhline{>{\arrayrulecolor{DarkBackground}}-} \SetRowColor{LightBackground} \mymulticolumn{1}{x{8.4cm}}{{\bf{polyribosomes:}} series of ribosomes moving over an mRNA at the same time \newline {\bf{chaperone protein:}} proteins that assist polypeptides in forming 3D structures \newline {\bf{signal peptides:}} sequence of amino acids at beginning of polypeptide tagging it to where it will go} \tn \hhline{>{\arrayrulecolor{DarkBackground}}-} \end{tabularx} \par\addvspace{1.3em} \begin{tabularx}{8.4cm}{X} \SetRowColor{DarkBackground} \mymulticolumn{1}{x{8.4cm}}{\bf\textcolor{white}{Nucleotide Mutations}} \tn \SetRowColor{LightBackground} \mymulticolumn{1}{p{8.4cm}}{\vspace{1px}\centerline{\includegraphics[width=5.1cm]{/web/www.cheatography.com/public/uploads/kmz-2022_1650316967_nucleotide mutations.png}}} \tn \hhline{>{\arrayrulecolor{DarkBackground}}-} \SetRowColor{LightBackground} \mymulticolumn{1}{x{8.4cm}}{{\bf{point mutation:}} change in a single nucleotide \newline {\bf{ frameshift mutation:}} change in nucleotide \# to not be a multiple of 3 \newline ↳ may still code for same amino acid \newline ↳ may code for stop codon early \newline ↳ may result in protein not functioning properly} \tn \hhline{>{\arrayrulecolor{DarkBackground}}-} \end{tabularx} \par\addvspace{1.3em} \begin{tabularx}{8.4cm}{x{3.68 cm} x{4.32 cm} } \SetRowColor{DarkBackground} \mymulticolumn{2}{x{8.4cm}}{\bf\textcolor{white}{Regulation of Gene Expression}} \tn % Row 0 \SetRowColor{LightBackground} \mymulticolumn{2}{x{8.4cm}}{- responds to changes in environmental conditions} \tn % Row Count 1 (+ 1) % Row 1 \SetRowColor{white} \mymulticolumn{2}{x{8.4cm}}{- either adjusts {\bf{activity}} of enzymes present or {\bf{production}} of enzymes} \tn % Row Count 3 (+ 2) % Row 2 \SetRowColor{LightBackground} - 3 things to make up an {\emph{operon}}: & operator; promoter; genes \tn % Row Count 5 (+ 2) % Row 3 \SetRowColor{white} {\bf{operator:}} & segment of DNA within promoter that controls the access of RNA polymerase to the genes \tn % Row Count 10 (+ 5) % Row 4 \SetRowColor{LightBackground} {\bf{repressor:}} & protein that binds to operator to block attachment of RNA polymerase \tn % Row Count 14 (+ 4) % Row 5 \SetRowColor{white} \mymulticolumn{2}{x{8.4cm}}{↳ made by activity of {\emph{regulatory gene}}} \tn % Row Count 15 (+ 1) % Row 6 \SetRowColor{LightBackground} {\bf{repressible operon:}} & transcription is inhibited by small molecule binding to regulatory protein \tn % Row Count 19 (+ 4) % Row 7 \SetRowColor{white} {\bf{inducible operon:}} & stimulated when small molecule binds to regulatory protein \tn % Row Count 22 (+ 3) \hhline{>{\arrayrulecolor{DarkBackground}}--} \end{tabularx} \par\addvspace{1.3em} \begin{tabularx}{8.4cm}{X} \SetRowColor{DarkBackground} \mymulticolumn{1}{x{8.4cm}}{\bf\textcolor{white}{Lac Operon}} \tn \SetRowColor{LightBackground} \mymulticolumn{1}{p{8.4cm}}{\vspace{1px}\centerline{\includegraphics[width=5.1cm]{/web/www.cheatography.com/public/uploads/kmz-2022_1650318655_lac operon.png}}} \tn \hhline{>{\arrayrulecolor{DarkBackground}}-} \SetRowColor{LightBackground} \mymulticolumn{1}{x{8.4cm}}{{\emph{- high lactose}} = allolactose bind to repressor to change shape \& no longer attach \newline {\emph{- low glucose}} = high levels of cAMP combine with CAP} \tn \hhline{>{\arrayrulecolor{DarkBackground}}-} \end{tabularx} \par\addvspace{1.3em} \begin{tabularx}{8.4cm}{X} \SetRowColor{DarkBackground} \mymulticolumn{1}{x{8.4cm}}{\bf\textcolor{white}{Differential Gene Expression}} \tn % Row 0 \SetRowColor{LightBackground} \mymulticolumn{1}{x{8.4cm}}{- differential gene expression = different cell types} \tn % Row Count 2 (+ 2) % Row 1 \SetRowColor{white} \mymulticolumn{1}{x{8.4cm}}{- 3 processes of development:} \tn % Row Count 3 (+ 1) % Row 2 \SetRowColor{LightBackground} \mymulticolumn{1}{x{8.4cm}}{{\bf{1.}} cell division {\bf{2.}} cell differentiation {\bf{3.}} morphogenesis} \tn % Row Count 5 (+ 2) % Row 3 \SetRowColor{white} \mymulticolumn{1}{x{8.4cm}}{{\bf{cytoplasmic determinants:}} substances in the egg that influence the course of early development} \tn % Row Count 7 (+ 2) % Row 4 \SetRowColor{LightBackground} \mymulticolumn{1}{x{8.4cm}}{{\bf{induction:}} embryonic cells influence the development of another (change in gene expression)} \tn % Row Count 9 (+ 2) % Row 5 \SetRowColor{white} \mymulticolumn{1}{x{8.4cm}}{{\bf{homeotic genes:}} genes that control pattern formation as an organism develops} \tn % Row Count 11 (+ 2) \hhline{>{\arrayrulecolor{DarkBackground}}-} \end{tabularx} \par\addvspace{1.3em} \begin{tabularx}{8.4cm}{X} \SetRowColor{DarkBackground} \mymulticolumn{1}{x{8.4cm}}{\bf\textcolor{white}{Biotechnology}} \tn % Row 0 \SetRowColor{LightBackground} \mymulticolumn{1}{x{8.4cm}}{{\bf{Gel electrophoresis}}} \tn % Row Count 1 (+ 1) % Row 1 \SetRowColor{white} \mymulticolumn{1}{x{8.4cm}}{- separates DNA by size and charge} \tn % Row Count 2 (+ 1) % Row 2 \SetRowColor{LightBackground} \mymulticolumn{1}{x{8.4cm}}{- DNA negatively charges} \tn % Row Count 3 (+ 1) % Row 3 \SetRowColor{white} \mymulticolumn{1}{x{8.4cm}}{↳ smaller segments = farther to bottom} \tn % Row Count 4 (+ 1) % Row 4 \SetRowColor{LightBackground} \mymulticolumn{1}{x{8.4cm}}{{\bf{Polymerase Chain Reaction (PCR)}}} \tn % Row Count 5 (+ 1) % Row 5 \SetRowColor{white} \mymulticolumn{1}{x{8.4cm}}{- create many copies of DNA segment} \tn % Row Count 6 (+ 1) % Row 6 \SetRowColor{LightBackground} \mymulticolumn{1}{x{8.4cm}}{↳ DNA denatured → primers added → DNA replicated} \tn % Row Count 8 (+ 2) % Row 7 \SetRowColor{white} \mymulticolumn{1}{x{8.4cm}}{{\bf{Recombinant DNA}}} \tn % Row Count 9 (+ 1) % Row 8 \SetRowColor{LightBackground} \mymulticolumn{1}{x{8.4cm}}{- DNA segment put into plasmid to be reproduced} \tn % Row Count 10 (+ 1) % Row 9 \SetRowColor{white} \mymulticolumn{1}{x{8.4cm}}{{\bf{DNA Sequencing}}} \tn % Row Count 11 (+ 1) % Row 10 \SetRowColor{LightBackground} \mymulticolumn{1}{x{8.4cm}}{- establish the order of nucleotides} \tn % Row Count 12 (+ 1) % Row 11 \SetRowColor{white} \mymulticolumn{1}{x{8.4cm}}{↳ labeled with dye} \tn % Row Count 13 (+ 1) \hhline{>{\arrayrulecolor{DarkBackground}}-} \end{tabularx} \par\addvspace{1.3em} % That's all folks \end{multicols*} \end{document}