\documentclass[10pt,a4paper]{article}

% Packages
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\usepackage{multicol}           % Allows multicols in tables
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\usepackage{graphicx}           % For images
\usepackage{xcolor}             % For hex colours
%\usepackage[utf8x]{inputenc}    % For unicode character support
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\usepackage{colortbl}           % For coloured tables
\usepackage{setspace}           % For line height
\usepackage{lastpage}           % Needed for total page number
\usepackage{seqsplit}           % Splits long words.
%\usepackage{opensans}          % Can't make this work so far. Shame. Would be lovely.
\usepackage[normalem]{ulem}     % For underlining links
% Most of the following are not required for the majority
% of cheat sheets but are needed for some symbol support.
\usepackage{amsmath}            % Symbols
\usepackage{MnSymbol}           % Symbols
\usepackage{wasysym}            % Symbols
%\usepackage[english,german,french,spanish,italian]{babel}              % Languages

% Document Info
\author{{[}deleted{]}}
\pdfinfo{
  /Title (gamess-linux.pdf)
  /Creator (Cheatography)
  /Author ({[}deleted{]})
  /Subject (Gamess/Linux Cheat Sheet)
}

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\newcommand{\SetRowColor}[1]{\noalign{\gdef\RowColorName{#1}}\rowcolor{\RowColorName}} % Shortcut for row colour
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% Header and Footer
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\fancyhead{} % Set header to blank
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\fancyhead[L]{
\noindent
\begin{multicols}{3}
\begin{tabulary}{5.8cm}{C}
    \SetRowColor{DarkBackground}
    \vspace{-7pt}
    {\parbox{\dimexpr\textwidth-2\fboxsep\relax}{\noindent
        \hspace*{-6pt}\includegraphics[width=5.8cm]{/web/www.cheatography.com/public/images/cheatography_logo.pdf}}
    }
\end{tabulary}
\columnbreak
\begin{tabulary}{11cm}{L}
    \vspace{-2pt}\large{\bf{\textcolor{DarkBackground}{\textrm{Gamess/Linux Cheat Sheet}}}} \\
    \normalsize{by \textcolor{DarkBackground}{{[}deleted{]}} via \textcolor{DarkBackground}{\uline{cheatography.com/69782/cs/17672/}}}
\end{tabulary}
\end{multicols}}

\fancyfoot[L]{ \footnotesize
\noindent
\begin{multicols}{3}
\begin{tabulary}{5.8cm}{LL}
  \SetRowColor{FootBackground}
  \mymulticolumn{2}{p{5.377cm}}{\bf\textcolor{white}{Cheatographer}}  \\
  \vspace{-2pt}{[}deleted{]} \\
  \uline{cheatography.com/deleted-69782} \\
  \end{tabulary}
\vfill
\columnbreak
\begin{tabulary}{5.8cm}{L}
  \SetRowColor{FootBackground}
  \mymulticolumn{1}{p{5.377cm}}{\bf\textcolor{white}{Cheat Sheet}}  \\
   \vspace{-2pt}Published 27th October, 2018.\\
   Updated 27th October, 2018.\\
   Page {\thepage} of \pageref{LastPage}.
\end{tabulary}
\vfill
\columnbreak
\begin{tabulary}{5.8cm}{L}
  \SetRowColor{FootBackground}
  \mymulticolumn{1}{p{5.377cm}}{\bf\textcolor{white}{Sponsor}}  \\
  \SetRowColor{white}
  \vspace{-5pt}
  %\includegraphics[width=48px,height=48px]{dave.jpeg}
  Measure your website readability!\\
  www.readability-score.com
\end{tabulary}
\end{multicols}}




\begin{document}
\raggedright
\raggedcolumns

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% from this page to resize cheat sheet text:
% www.emerson.emory.edu/services/latex/latex_169.html
\footnotesize % Small font.

\begin{multicols*}{3}

\begin{tabularx}{5.377cm}{p{0.79632 cm} x{4.18068 cm} }
\SetRowColor{DarkBackground}
\mymulticolumn{2}{x{5.377cm}}{\bf\textcolor{white}{Linux commands}}  \tn
% Row 0
\SetRowColor{LightBackground}
`cd` & Change directory \tn 
% Row Count 1 (+ 1)
% Row 1
\SetRowColor{white}
\seqsplit{`mkdir`} & Create directory \tn 
% Row Count 3 (+ 2)
% Row 2
\SetRowColor{LightBackground}
\seqsplit{`rmdir`} & Remove directory \tn 
% Row Count 5 (+ 2)
% Row 3
\SetRowColor{white}
`rm` & Remove file \tn 
% Row Count 6 (+ 1)
% Row 4
\SetRowColor{LightBackground}
`cp` & Copy file \tn 
% Row Count 7 (+ 1)
% Row 5
\SetRowColor{white}
`ls` & List of content of current directory \tn 
% Row Count 9 (+ 2)
\hhline{>{\arrayrulecolor{DarkBackground}}--}
\SetRowColor{LightBackground}
\mymulticolumn{2}{x{5.377cm}}{Exemple:  `cp he.inp he3216.inp ` \newline This will copy the file he.inp and rename the copy as he3216.inp}  \tn 
\hhline{>{\arrayrulecolor{DarkBackground}}--}
\end{tabularx}
\par\addvspace{1.3em}

\begin{tabularx}{5.377cm}{x{2.68758 cm} x{2.28942 cm} }
\SetRowColor{DarkBackground}
\mymulticolumn{2}{x{5.377cm}}{\bf\textcolor{white}{The studied atom/molecule}}  \tn
% Row 0
\SetRowColor{LightBackground}
Multiplicity (n number of umpaired electron) & n+1(n number of umpaired electron) \tn 
% Row Count 3 (+ 3)
% Row 1
\SetRowColor{white}
Charge & +/-/0 \tn 
% Row Count 4 (+ 1)
\hhline{>{\arrayrulecolor{DarkBackground}}--}
\end{tabularx}
\par\addvspace{1.3em}

\begin{tabularx}{5.377cm}{x{1.19448 cm} x{3.78252 cm} }
\SetRowColor{DarkBackground}
\mymulticolumn{2}{x{5.377cm}}{\bf\textcolor{white}{Run gamess}}  \tn
% Row 0
\SetRowColor{LightBackground}
`he.inp` & name of the input script \tn 
% Row Count 1 (+ 1)
% Row 1
\SetRowColor{white}
`he.out` & name of the output script \tn 
% Row Count 2 (+ 1)
% Row 2
\SetRowColor{LightBackground}
`rungms` & run gamess \tn 
% Row Count 3 (+ 1)
\hhline{>{\arrayrulecolor{DarkBackground}}--}
\SetRowColor{LightBackground}
\mymulticolumn{2}{x{5.377cm}}{Exemple : `rungms he\textgreater{}he.out` \newline Will run gamess with the script he.inp, and give you the output in the file he.out}  \tn 
\hhline{>{\arrayrulecolor{DarkBackground}}--}
\end{tabularx}
\par\addvspace{1.3em}

\begin{tabularx}{5.377cm}{X}
\SetRowColor{DarkBackground}
\mymulticolumn{1}{x{5.377cm}}{\bf\textcolor{white}{Output file}}  \tn
% Row 0
\SetRowColor{LightBackground}
\mymulticolumn{1}{x{5.377cm}}{How to see if my calculation worked?} \tn 
\mymulticolumn{1}{x{5.377cm}}{\hspace*{6 px}\rule{2px}{6px}\hspace*{6 px}Look `density converged` in the output file} \tn 
% Row Count 2 (+ 2)
% Row 1
\SetRowColor{white}
\mymulticolumn{1}{x{5.377cm}}{Where to see the final energy (HF) ?} \tn 
\mymulticolumn{1}{x{5.377cm}}{\hspace*{6 px}\rule{2px}{6px}\hspace*{6 px}Right after the message `density converged` the Hartree Fock energy calculation is provided `FINAL RHF ENERGY IS=`} \tn 
% Row Count 6 (+ 4)
% Row 2
\SetRowColor{LightBackground}
\mymulticolumn{1}{x{5.377cm}}{Where to see the final energy (MP2/CCSD) ?} \tn 
\mymulticolumn{1}{x{5.377cm}}{\hspace*{6 px}\rule{2px}{6px}\hspace*{6 px}Look for a message `E(MP2/CCSD)=`} \tn 
% Row Count 8 (+ 2)
% Row 3
\SetRowColor{white}
\mymulticolumn{1}{x{5.377cm}}{How to see the number of basis fonction?} \tn 
\mymulticolumn{1}{x{5.377cm}}{\hspace*{6 px}\rule{2px}{6px}\hspace*{6 px}Beginning of the output script there is a recap of the input script, and search for `Nb of cartesian basis fonction=`} \tn 
% Row Count 12 (+ 4)
\hhline{>{\arrayrulecolor{DarkBackground}}-}
\SetRowColor{LightBackground}
\mymulticolumn{1}{x{5.377cm}}{\{\{fa-exclamation-triangle\}\} RHF final energy is always provided even if you don't do HF calculation.}  \tn 
\hhline{>{\arrayrulecolor{DarkBackground}}-}
\end{tabularx}
\par\addvspace{1.3em}

\begin{tabularx}{5.377cm}{x{1.46464 cm} x{1.23579 cm} x{1.87657 cm} }
\SetRowColor{DarkBackground}
\mymulticolumn{3}{x{5.377cm}}{\bf\textcolor{white}{Input in \$BASIS}}  \tn
% Row 0
\SetRowColor{LightBackground}
STO-{\emph{n}}G & \seqsplit{`GBASIS=STO`} & `NGAUSS={\emph{n}}` \tn 
% Row Count 2 (+ 2)
% Row 1
\SetRowColor{white}
{\emph{n}}-21G & \seqsplit{`GBASIS=N21`} & `NGAUSS={\emph{n}}` \tn 
% Row Count 4 (+ 2)
% Row 2
\SetRowColor{LightBackground}
{\emph{n}}-31G & \seqsplit{`GBASIS=N31`} & `NGAUSS={\emph{n}}` \tn 
% Row Count 6 (+ 2)
% Row 3
\SetRowColor{white}
{\emph{n}}-311G & \seqsplit{`GBASIS=N311`} & `NGAUSS={\emph{n}}` \tn 
% Row Count 8 (+ 2)
% Row 4
\SetRowColor{LightBackground}
cc-PV{\emph{n}}Z & `GBASIS=CC{\emph{n}}` & \{\{fa-exclamation\}\}`ISPHERE=1` in `\$CONTROL` \tn 
% Row Count 11 (+ 3)
% Row 5
\SetRowColor{white}
{\emph{x}} shell \seqsplit{polarisation} function & `N{\emph{x}}FUNC={\emph{number of set}}` & {\emph{x}}=p, d, f \tn 
% Row Count 14 (+ 3)
% Row 6
\SetRowColor{LightBackground}
Semi empirical methods & \seqsplit{`GBASIS=MNDO`} &  \tn 
% Row Count 16 (+ 2)
% Row 7
\SetRowColor{white}
 & \seqsplit{`GBASIS=AM1`} &  \tn 
% Row Count 18 (+ 2)
% Row 8
\SetRowColor{LightBackground}
 & \seqsplit{`GBASIS=PM3`} &  \tn 
% Row Count 20 (+ 2)
\hhline{>{\arrayrulecolor{DarkBackground}}---}
\SetRowColor{LightBackground}
\mymulticolumn{3}{x{5.377cm}}{Exemple:  \newline \{\{fa-caret-right\}\}Calculation with 6-31G{\emph{ Basis set for He \newline `GBASIS=N31 NGAUSS=6 NPFUNC=1` \newline \{\{fa-caret-right\}\}Calculation with 6-31G}}* Basis set for He \newline `GBASIS=N31 NGAUSS=6 NPFUNC=2` \newline Use P because He is full on s, not on p}  \tn 
\hhline{>{\arrayrulecolor{DarkBackground}}---}
\end{tabularx}
\par\addvspace{1.3em}

\begin{tabularx}{5.377cm}{X}
\SetRowColor{DarkBackground}
\mymulticolumn{1}{x{5.377cm}}{\bf\textcolor{white}{Input in \$DATA}}  \tn
\SetRowColor{white}
\mymulticolumn{1}{x{5.377cm}}{1. title/details \newline % Row Count 1 (+ 1)
2. symmetry point group, usualy C1 \newline % Row Count 2 (+ 1)
3. empty line, unless symmetry different than C1 \newline % Row Count 3 (+ 1)
4. Atomic coordinates \newline % Row Count 4 (+ 1)
 \{\{fa-caret-right\}\}`COORDS=CART ` \newline % Row Count 5 (+ 1)
atome name / nuclear charge / X / Y / Z \newline % Row Count 6 (+ 1)
 `H  1  0.0 0.0 0.0  ` \newline % Row Count 7 (+ 1)
 `C  6  1.1 0.0 0.0  ` \newline % Row Count 8 (+ 1)
 \{\{fa-caret-right\}\}`COORDS=ZMT ` \newline % Row Count 9 (+ 1)
atom / I / distance / J / angle / K / torsion \newline % Row Count 10 (+ 1)
 `H 1 1.1 2 125.0 3 180.0  ` \newline % Row Count 11 (+ 1)
 \{\{fa-caret-right\}\}`COORDS=ZMTMPC ` \newline % Row Count 12 (+ 1)
atom / distance / 1 / angle / 1 / torsion / I / J / K \newline % Row Count 14 (+ 2)
 `H 1.1 1 125.0 1 180.0 1 2 3 `% Row Count 15 (+ 1)
} \tn 
\hhline{>{\arrayrulecolor{DarkBackground}}-}
\SetRowColor{LightBackground}
\mymulticolumn{1}{x{5.377cm}}{\{\{fa-exclamation-triangle\}\} For `COORDS=ZMT ` and `COORDS=ZMTMPC `, only put the required data !  \newline Atom 1 : only name  \newline Atome 2 : name + distance \newline Atome 3 : name + distance + angle \newline Atome 4 and + : all data}  \tn 
\hhline{>{\arrayrulecolor{DarkBackground}}-}
\end{tabularx}
\par\addvspace{1.3em}

\begin{tabularx}{5.377cm}{x{1.60195 cm} x{1.78503 cm} x{1.19002 cm} }
\SetRowColor{DarkBackground}
\mymulticolumn{3}{x{5.377cm}}{\bf\textcolor{white}{Input in \$CONTRL}}  \tn
% Row 0
\SetRowColor{LightBackground}
Method/Wave function choice & Close Shell System & \seqsplit{`SCFTYP=RHF`} default \tn 
% Row Count 2 (+ 2)
% Row 1
\SetRowColor{white}
 & Open Shell System & `SCFTYP= UHF` \tn 
% Row Count 4 (+ 2)
% Row 2
\SetRowColor{LightBackground}
 &  & `SCFTYP= ROHF` \tn 
% Row Count 6 (+ 2)
% Row 3
\SetRowColor{white}
 &  & \seqsplit{`SCFTYP=GVB`} \tn 
% Row Count 8 (+ 2)
% Row 4
\SetRowColor{LightBackground}
 &  & `SCFTYP= MCSCF` \tn 
% Row Count 10 (+ 2)
% Row 5
\SetRowColor{white}
Electron correlation method & \seqsplit{Mollera-Plesseta} MP{\emph{n}} & `MPLEVL={\emph{n}}` \tn 
% Row Count 12 (+ 2)
% Row 6
\SetRowColor{LightBackground}
 & DFT & `DFTTYP= {\emph{word}}` \tn 
% Row Count 14 (+ 2)
% Row 7
\SetRowColor{white}
 & \seqsplit{coupled-cluster} CC & `CCTYP= {\emph{word}}` \tn 
% Row Count 16 (+ 2)
% Row 8
\SetRowColor{LightBackground}
 & configuration interaction CI & `CITYP= {\emph{word}}` \tn 
% Row Count 18 (+ 2)
% Row 9
\SetRowColor{white}
 & valence bond VB & `VBTYP= {\emph{word}}` \tn 
% Row Count 20 (+ 2)
% Row 10
\SetRowColor{LightBackground}
 & TDDFT & `TDDFT= {\emph{word}}` \tn 
% Row Count 22 (+ 2)
% Row 11
\SetRowColor{white}
Other & Charge {\emph{n}} of molecule & `ICHARG={\emph{n}}` \tn 
% Row Count 24 (+ 2)
% Row 12
\SetRowColor{LightBackground}
 & Multiplicity {\emph{n}} of molecule & `MULT={\emph{n}}` \tn 
% Row Count 26 (+ 2)
% Row 13
\SetRowColor{white}
 & Format of geometry in  `\$DATA ` & `COORDS= {\emph{word}}` \tn 
% Row Count 29 (+ 3)
\hhline{>{\arrayrulecolor{DarkBackground}}---}
\SetRowColor{LightBackground}
\mymulticolumn{3}{x{5.377cm}}{DFT method's words: `VWN/BP86/BLYP...` \newline CC method's words: `CCD/CCSD/CCSD(T)...` \newline Words for coordinates:  `CART/ZMT/ZMTMPC `}  \tn 
\hhline{>{\arrayrulecolor{DarkBackground}}---}
\end{tabularx}
\par\addvspace{1.3em}


% That's all folks
\end{multicols*}

\end{document}