\documentclass[10pt,a4paper]{article} % Packages \usepackage{fancyhdr} % For header and footer \usepackage{multicol} % Allows multicols in tables \usepackage{tabularx} % Intelligent column widths \usepackage{tabulary} % Used in header and footer \usepackage{hhline} % Border under tables \usepackage{graphicx} % For images \usepackage{xcolor} % For hex colours %\usepackage[utf8x]{inputenc} % For unicode character support \usepackage[T1]{fontenc} % Without this we get weird character replacements \usepackage{colortbl} % For coloured tables \usepackage{setspace} % For line height \usepackage{lastpage} % Needed for total page number \usepackage{seqsplit} % Splits long words. %\usepackage{opensans} % Can't make this work so far. Shame. Would be lovely. \usepackage[normalem]{ulem} % For underlining links % Most of the following are not required for the majority % of cheat sheets but are needed for some symbol support. \usepackage{amsmath} % Symbols \usepackage{MnSymbol} % Symbols \usepackage{wasysym} % Symbols %\usepackage[english,german,french,spanish,italian]{babel} % Languages % Document Info \author{Carm (Carmilaa)} \pdfinfo{ /Title (oral-microbial-ecology.pdf) /Creator (Cheatography) /Author (Carm (Carmilaa)) /Subject (Oral Microbial Ecology Cheat Sheet) } % Lengths and widths \addtolength{\textwidth}{6cm} \addtolength{\textheight}{-1cm} \addtolength{\hoffset}{-3cm} \addtolength{\voffset}{-2cm} \setlength{\tabcolsep}{0.2cm} % Space between columns \setlength{\headsep}{-12pt} % Reduce space between header and content \setlength{\headheight}{85pt} % If less, LaTeX automatically increases it \renewcommand{\footrulewidth}{0pt} % Remove footer line \renewcommand{\headrulewidth}{0pt} % Remove header line \renewcommand{\seqinsert}{\ifmmode\allowbreak\else\-\fi} % Hyphens in seqsplit % This two commands together give roughly % the right line height in the tables \renewcommand{\arraystretch}{1.3} \onehalfspacing % Commands \newcommand{\SetRowColor}[1]{\noalign{\gdef\RowColorName{#1}}\rowcolor{\RowColorName}} % Shortcut for row colour \newcommand{\mymulticolumn}[3]{\multicolumn{#1}{>{\columncolor{\RowColorName}}#2}{#3}} % For coloured multi-cols \newcolumntype{x}[1]{>{\raggedright}p{#1}} % New column types for ragged-right paragraph columns \newcommand{\tn}{\tabularnewline} % Required as custom column type in use % Font and Colours \definecolor{HeadBackground}{HTML}{333333} \definecolor{FootBackground}{HTML}{666666} \definecolor{TextColor}{HTML}{333333} \definecolor{DarkBackground}{HTML}{5E83AD} \definecolor{LightBackground}{HTML}{F4F7F9} \renewcommand{\familydefault}{\sfdefault} \color{TextColor} % Header and Footer \pagestyle{fancy} \fancyhead{} % Set header to blank \fancyfoot{} % Set footer to blank \fancyhead[L]{ \noindent \begin{multicols}{3} \begin{tabulary}{5.8cm}{C} \SetRowColor{DarkBackground} \vspace{-7pt} {\parbox{\dimexpr\textwidth-2\fboxsep\relax}{\noindent \hspace*{-6pt}\includegraphics[width=5.8cm]{/web/www.cheatography.com/public/images/cheatography_logo.pdf}} } \end{tabulary} \columnbreak \begin{tabulary}{11cm}{L} \vspace{-2pt}\large{\bf{\textcolor{DarkBackground}{\textrm{Oral Microbial Ecology Cheat Sheet}}}} \\ \normalsize{by \textcolor{DarkBackground}{Carm (Carmilaa)} via \textcolor{DarkBackground}{\uline{cheatography.com/49544/cs/17013/}}} \end{tabulary} \end{multicols}} \fancyfoot[L]{ \footnotesize \noindent \begin{multicols}{3} \begin{tabulary}{5.8cm}{LL} \SetRowColor{FootBackground} \mymulticolumn{2}{p{5.377cm}}{\bf\textcolor{white}{Cheatographer}} \\ \vspace{-2pt}Carm (Carmilaa) \\ \uline{cheatography.com/carmilaa} \\ \end{tabulary} \vfill \columnbreak \begin{tabulary}{5.8cm}{L} \SetRowColor{FootBackground} \mymulticolumn{1}{p{5.377cm}}{\bf\textcolor{white}{Cheat Sheet}} \\ \vspace{-2pt}Published 10th September, 2018.\\ Updated 10th September, 2018.\\ Page {\thepage} of \pageref{LastPage}. \end{tabulary} \vfill \columnbreak \begin{tabulary}{5.8cm}{L} \SetRowColor{FootBackground} \mymulticolumn{1}{p{5.377cm}}{\bf\textcolor{white}{Sponsor}} \\ \SetRowColor{white} \vspace{-5pt} %\includegraphics[width=48px,height=48px]{dave.jpeg} Measure your website readability!\\ www.readability-score.com \end{tabulary} \end{multicols}} \begin{document} \raggedright \raggedcolumns % Set font size to small. Switch to any value % from this page to resize cheat sheet text: % www.emerson.emory.edu/services/latex/latex_169.html \footnotesize % Small font. \begin{multicols*}{3} \begin{tabularx}{5.377cm}{X} \SetRowColor{DarkBackground} \mymulticolumn{1}{x{5.377cm}}{\bf\textcolor{white}{{\bf{Oral Ecosystem:}}}} \tn % Row 0 \SetRowColor{LightBackground} \mymulticolumn{1}{x{5.377cm}}{- Specific microbial species demonstrating tropism for specific tissues} \tn % Row Count 2 (+ 2) % Row 1 \SetRowColor{white} \mymulticolumn{1}{x{5.377cm}}{- Microbial interaction with each other as well as with the oral environment} \tn % Row Count 4 (+ 2) \hhline{>{\arrayrulecolor{DarkBackground}}-} \end{tabularx} \par\addvspace{1.3em} \begin{tabularx}{5.377cm}{x{2.04057 cm} x{2.93643 cm} } \SetRowColor{DarkBackground} \mymulticolumn{2}{x{5.377cm}}{\bf\textcolor{white}{{\bf{Formation of an Ecosystem:}}}} \tn % Row 0 \SetRowColor{LightBackground} {\bf{Indigenous Microbiota:}} & Most numerous, Compatible with host \tn % Row Count 2 (+ 2) % Row 1 \SetRowColor{white} {\bf{Supplemental Microbiota:}} & Potentially pathogenic, Can become invasive \tn % Row Count 4 (+ 2) % Row 2 \SetRowColor{LightBackground} {\bf{Transient Microbiota:}} & Don't have mechanisms for persisting in the host \tn % Row Count 7 (+ 3) \hhline{>{\arrayrulecolor{DarkBackground}}--} \end{tabularx} \par\addvspace{1.3em} \begin{tabularx}{5.377cm}{x{2.63781 cm} x{2.33919 cm} } \SetRowColor{DarkBackground} \mymulticolumn{2}{x{5.377cm}}{\bf\textcolor{white}{{\bf{Oral Ecosystems:}}}} \tn % Row 0 \SetRowColor{LightBackground} {\bf{Buccal epithelium:}} & Gram-positive cocci \tn % Row Count 2 (+ 2) % Row 1 \SetRowColor{white} {\bf{Lingual epithelium:}} & Gram-positive filaments \tn % Row Count 4 (+ 2) % Row 2 \SetRowColor{LightBackground} {\bf{Supragingival tooth surface:}} & Faculative G+ rods and cocci \tn % Row Count 6 (+ 2) % Row 3 \SetRowColor{white} {\bf{Subgingival tooth surface:}} & Anaerobic G- rods and cocci \tn % Row Count 8 (+ 2) \hhline{>{\arrayrulecolor{DarkBackground}}--} \end{tabularx} \par\addvspace{1.3em} \begin{tabularx}{5.377cm}{X} \SetRowColor{DarkBackground} \mymulticolumn{1}{x{5.377cm}}{\bf\textcolor{white}{{\bf{Microenvironments:}}}} \tn \SetRowColor{white} \mymulticolumn{1}{x{5.377cm}}{{\bf{Supragingival:}} \newline % Row Count 1 (+ 1) -Bathed in saliva \newline % Row Count 2 (+ 1) -Faculatively anaerobic \newline % Row Count 3 (+ 1) -Increased mechanical disruption (swallowing, abrasion)% Row Count 5 (+ 2) } \tn \hhline{>{\arrayrulecolor{DarkBackground}}-} \SetRowColor{LightBackground} \mymulticolumn{1}{x{5.377cm}}{{\bf{Subgingival:}} \newline \newline -Bathed in crevicular fluid \newline -Anaerobic \newline -Reduced mechanical disruption (anatomy of gingival sulcus)} \tn \hhline{>{\arrayrulecolor{DarkBackground}}-} \end{tabularx} \par\addvspace{1.3em} \begin{tabularx}{5.377cm}{x{2.14011 cm} x{2.83689 cm} } \SetRowColor{DarkBackground} \mymulticolumn{2}{x{5.377cm}}{\bf\textcolor{white}{{\bf{Environmental Factors:}}}} \tn % Row 0 \SetRowColor{LightBackground} {\bf{Oxygen tension:}} & pO2, partial pressure of oxygen, mmHg \tn % Row Count 2 (+ 2) % Row 1 \SetRowColor{white} {\bf{Redox Potential:}} & Eh, tendency to acquire electrons and thus be reduced, mV \tn % Row Count 5 (+ 3) % Row 2 \SetRowColor{LightBackground} {\bf{pH:}} & controlled by exogenous materials carbohydrate fermentation buffering capacity of plaque and saliva \tn % Row Count 10 (+ 5) % Row 3 \SetRowColor{white} {\bf{Temperature:}} & variations \tn % Row Count 11 (+ 1) % Row 4 \SetRowColor{LightBackground} {\bf{Availability of Nutrients:}} & carbohydrates, amino acids (salivary glycoproteins), hemin (plasma) \tn % Row Count 15 (+ 4) \hhline{>{\arrayrulecolor{DarkBackground}}--} \end{tabularx} \par\addvspace{1.3em} \begin{tabularx}{5.377cm}{x{1.64241 cm} x{3.33459 cm} } \SetRowColor{DarkBackground} \mymulticolumn{2}{x{5.377cm}}{\bf\textcolor{white}{{\bf{Host Fluids:}}}} \tn % Row 0 \SetRowColor{LightBackground} \mymulticolumn{2}{x{5.377cm}}{{\bf{Antagonists}}} \tn % Row Count 1 (+ 1) % Row 1 \SetRowColor{white} {\bf{Synergistic:}} & Nutrients from saliva and GCF \tn % Row Count 3 (+ 2) % Row 2 \SetRowColor{LightBackground} {\bf{sIgA:}} & Interferes with colonisation \tn % Row Count 5 (+ 2) % Row 3 \SetRowColor{white} {\bf{Glycoproteins:}} & Aggregation and removal \tn % Row Count 7 (+ 2) % Row 4 \SetRowColor{LightBackground} {\bf{Lactoperoxidase:}} & Inactivation of glycolytic enzymes - death \tn % Row Count 9 (+ 2) % Row 5 \SetRowColor{white} {\bf{Lactoferrin:}} & Binds iron limiting bacterial growth \tn % Row Count 11 (+ 2) % Row 6 \SetRowColor{LightBackground} {\bf{Lysozyme:}} & Degrades bacterial peptidoglycan \tn % Row Count 13 (+ 2) \hhline{>{\arrayrulecolor{DarkBackground}}--} \SetRowColor{LightBackground} \mymulticolumn{2}{x{5.377cm}}{{\bf{Host Susceptibility:}} \newline - Geographic location \newline - Ethnicity and culture \newline - Diet \newline - Health and social status} \tn \hhline{>{\arrayrulecolor{DarkBackground}}--} \end{tabularx} \par\addvspace{1.3em} \begin{tabularx}{5.377cm}{X} \SetRowColor{DarkBackground} \mymulticolumn{1}{x{5.377cm}}{\bf\textcolor{white}{{\bf{Microbial Factors:}}}} \tn \SetRowColor{white} \mymulticolumn{1}{x{5.377cm}}{{\bf{Adherence:}} \newline % Row Count 1 (+ 1) - Contact: proximity \newline % Row Count 2 (+ 1) - Dose: quantity of bacteria \newline % Row Count 3 (+ 1) - Frequency of exposure (eg newborns) \newline % Row Count 4 (+ 1) - Absorption: initial reversible association with oral tissues% Row Count 6 (+ 2) } \tn \hhline{>{\arrayrulecolor{DarkBackground}}-} \SetRowColor{LightBackground} \mymulticolumn{1}{x{5.377cm}}{{\bf{Retention:}} \newline - Ability to accumulate at entry site \newline - Adaption \newline - Resist host defenses \newline - Competition from other species \newline - Changing environments} \tn \hhline{>{\arrayrulecolor{DarkBackground}}-} \end{tabularx} \par\addvspace{1.3em} \begin{tabularx}{5.377cm}{X} \SetRowColor{DarkBackground} \mymulticolumn{1}{x{5.377cm}}{\bf\textcolor{white}{{\bf{Co-Aggregation:}}}} \tn % Row 0 \SetRowColor{LightBackground} \mymulticolumn{1}{x{5.377cm}}{{\bf{Different species, or different strains of a single species, have distinct sets of coaggregation partners}}} \tn \mymulticolumn{1}{x{5.377cm}}{\hspace*{6 px}\rule{2px}{6px}\hspace*{6 px}Streptococcus spp. and Actinomyces spp., two of initial colonizing general on enamel surfaces} \tn % Row Count 5 (+ 5) % Row 1 \SetRowColor{white} \mymulticolumn{1}{x{5.377cm}}{} \tn \mymulticolumn{1}{x{5.377cm}}{\hspace*{6 px}\rule{2px}{6px}\hspace*{6 px}Fusobacbacteria coaggregate w/ other human oral bacteria} \tn % Row Count 7 (+ 2) % Row 2 \SetRowColor{LightBackground} \mymulticolumn{1}{x{5.377cm}}{} \tn \mymulticolumn{1}{x{5.377cm}}{\hspace*{6 px}\rule{2px}{6px}\hspace*{6 px}Veillonella spp., Capnocytophaga spp. bind to streptococci/ actinomyces} \tn % Row Count 9 (+ 2) \hhline{>{\arrayrulecolor{DarkBackground}}-} \SetRowColor{LightBackground} \mymulticolumn{1}{x{5.377cm}}{{\bf{Each coaggregation is mediated by one or more complementary sets of adhesin-receptor pairs}}} \tn \hhline{>{\arrayrulecolor{DarkBackground}}-} \end{tabularx} \par\addvspace{1.3em} \begin{tabularx}{5.377cm}{X} \SetRowColor{DarkBackground} \mymulticolumn{1}{x{5.377cm}}{\bf\textcolor{white}{{\bf{Coaggregation:}}}} \tn \SetRowColor{LightBackground} \mymulticolumn{1}{p{5.377cm}}{\vspace{1px}\centerline{\includegraphics[width=5.1cm]{/web/www.cheatography.com/public/uploads/carmilaa_1536604761_OE1.PNG}}} \tn \hhline{>{\arrayrulecolor{DarkBackground}}-} \SetRowColor{LightBackground} \mymulticolumn{1}{x{5.377cm}}{{\bf{CoAggregation Competition:}} \newline - Competition occurs when multiple cell types recognize the same coggregation indicator mediator on the common coaggregation partner} \tn \hhline{>{\arrayrulecolor{DarkBackground}}-} \end{tabularx} \par\addvspace{1.3em} \begin{tabularx}{5.377cm}{X} \SetRowColor{DarkBackground} \mymulticolumn{1}{x{5.377cm}}{\bf\textcolor{white}{{\bf{Ecological Succession:}}}} \tn % Row 0 \SetRowColor{LightBackground} \mymulticolumn{1}{x{5.377cm}}{Process by whereby a {\bf{microbial population undergoes a continuous series of changes in composition as different species colonise and become established at the expense of others.}}} \tn % Row Count 4 (+ 4) \hhline{>{\arrayrulecolor{DarkBackground}}-} \SetRowColor{LightBackground} \mymulticolumn{1}{x{5.377cm}}{As conditions change, the {\bf{dominant m/o's will either adapt and be retained or will be superseded by a new species better equipped to survive the altered environment.}}} \tn \hhline{>{\arrayrulecolor{DarkBackground}}-} \end{tabularx} \par\addvspace{1.3em} % That's all folks \end{multicols*} \end{document}