\documentclass[10pt,a4paper]{article} % Packages \usepackage{fancyhdr} % For header and footer \usepackage{multicol} % Allows multicols in tables \usepackage{tabularx} % Intelligent column widths \usepackage{tabulary} % Used in header and footer \usepackage{hhline} % Border under tables \usepackage{graphicx} % For images \usepackage{xcolor} % For hex colours %\usepackage[utf8x]{inputenc} % For unicode character support \usepackage[T1]{fontenc} % Without this we get weird character replacements \usepackage{colortbl} % For coloured tables \usepackage{setspace} % For line height \usepackage{lastpage} % Needed for total page number \usepackage{seqsplit} % Splits long words. %\usepackage{opensans} % Can't make this work so far. Shame. Would be lovely. \usepackage[normalem]{ulem} % For underlining links % Most of the following are not required for the majority % of cheat sheets but are needed for some symbol support. \usepackage{amsmath} % Symbols \usepackage{MnSymbol} % Symbols \usepackage{wasysym} % Symbols %\usepackage[english,german,french,spanish,italian]{babel} % Languages % Document Info \author{annadanpd} \pdfinfo{ /Title (chapter-17-bio-study-guide.pdf) /Creator (Cheatography) /Author (annadanpd) /Subject (Chapter 17 Bio Study Guide Cheat Sheet) } % Lengths and widths \addtolength{\textwidth}{6cm} \addtolength{\textheight}{-1cm} \addtolength{\hoffset}{-3cm} \addtolength{\voffset}{-2cm} \setlength{\tabcolsep}{0.2cm} % Space between columns \setlength{\headsep}{-12pt} % Reduce space between header and content \setlength{\headheight}{85pt} % If less, LaTeX automatically increases it \renewcommand{\footrulewidth}{0pt} % Remove footer line \renewcommand{\headrulewidth}{0pt} % Remove header line \renewcommand{\seqinsert}{\ifmmode\allowbreak\else\-\fi} % Hyphens in seqsplit % This two commands together give roughly % the right line height in the tables \renewcommand{\arraystretch}{1.3} \onehalfspacing % Commands \newcommand{\SetRowColor}[1]{\noalign{\gdef\RowColorName{#1}}\rowcolor{\RowColorName}} % Shortcut for row colour \newcommand{\mymulticolumn}[3]{\multicolumn{#1}{>{\columncolor{\RowColorName}}#2}{#3}} % For coloured multi-cols \newcolumntype{x}[1]{>{\raggedright}p{#1}} % New column types for ragged-right paragraph columns \newcommand{\tn}{\tabularnewline} % Required as custom column type in use % Font and Colours \definecolor{HeadBackground}{HTML}{333333} \definecolor{FootBackground}{HTML}{666666} \definecolor{TextColor}{HTML}{333333} \definecolor{DarkBackground}{HTML}{A3627C} \definecolor{LightBackground}{HTML}{F9F5F6} \renewcommand{\familydefault}{\sfdefault} \color{TextColor} % Header and Footer \pagestyle{fancy} \fancyhead{} % Set header to blank \fancyfoot{} % Set footer to blank \fancyhead[L]{ \noindent \begin{multicols}{3} \begin{tabulary}{5.8cm}{C} \SetRowColor{DarkBackground} \vspace{-7pt} {\parbox{\dimexpr\textwidth-2\fboxsep\relax}{\noindent \hspace*{-6pt}\includegraphics[width=5.8cm]{/web/www.cheatography.com/public/images/cheatography_logo.pdf}} } \end{tabulary} \columnbreak \begin{tabulary}{11cm}{L} \vspace{-2pt}\large{\bf{\textcolor{DarkBackground}{\textrm{Chapter 17 Bio Study Guide Cheat Sheet}}}} \\ \normalsize{by \textcolor{DarkBackground}{annadanpd} via \textcolor{DarkBackground}{\uline{cheatography.com/32659/cs/10101/}}} \end{tabulary} \end{multicols}} \fancyfoot[L]{ \footnotesize \noindent \begin{multicols}{3} \begin{tabulary}{5.8cm}{LL} \SetRowColor{FootBackground} \mymulticolumn{2}{p{5.377cm}}{\bf\textcolor{white}{Cheatographer}} \\ \vspace{-2pt}annadanpd \\ \uline{cheatography.com/annadanpd} \\ \end{tabulary} \vfill \columnbreak \begin{tabulary}{5.8cm}{L} \SetRowColor{FootBackground} \mymulticolumn{1}{p{5.377cm}}{\bf\textcolor{white}{Cheat Sheet}} \\ \vspace{-2pt}Published 6th December, 2016.\\ Updated 6th December, 2016.\\ Page {\thepage} of \pageref{LastPage}. \end{tabulary} \vfill \columnbreak \begin{tabulary}{5.8cm}{L} \SetRowColor{FootBackground} \mymulticolumn{1}{p{5.377cm}}{\bf\textcolor{white}{Sponsor}} \\ \SetRowColor{white} \vspace{-5pt} %\includegraphics[width=48px,height=48px]{dave.jpeg} Measure your website readability!\\ www.readability-score.com \end{tabulary} \end{multicols}} \begin{document} \raggedright \raggedcolumns % Set font size to small. Switch to any value % from this page to resize cheat sheet text: % www.emerson.emory.edu/services/latex/latex_169.html \footnotesize % Small font. \begin{multicols*}{3} \begin{tabularx}{5.377cm}{X} \SetRowColor{DarkBackground} \mymulticolumn{1}{x{5.377cm}}{\bf\textcolor{white}{Gene to Protein}} \tn % Row 0 \SetRowColor{LightBackground} \mymulticolumn{1}{x{5.377cm}}{inherited DNA leads to specific traits by dictating the synthesis of proteins} \tn % Row Count 2 (+ 2) \hhline{>{\arrayrulecolor{DarkBackground}}-} \end{tabularx} \par\addvspace{1.3em} \begin{tabularx}{5.377cm}{x{1.59264 cm} x{3.38436 cm} } \SetRowColor{DarkBackground} \mymulticolumn{2}{x{5.377cm}}{\bf\textcolor{white}{From Gene to Protein (cont.)}} \tn % Row 0 \SetRowColor{LightBackground} {\bf{Gene expression}} & process by which DNA directs protein synthesis (2 stages) \tn % Row Count 3 (+ 3) % Row 1 \SetRowColor{white} {\emph{Transcription}} & the synthesis of RNA using a DNA template \tn % Row Count 5 (+ 2) % Row 2 \SetRowColor{LightBackground} {\emph{Translation}} & the synthesis of a polypeptide using the genetic information encoded in mRNA. (nucleotides to amino acids) \tn % Row Count 9 (+ 4) \hhline{>{\arrayrulecolor{DarkBackground}}--} \end{tabularx} \par\addvspace{1.3em} \begin{tabularx}{5.377cm}{x{2.18988 cm} x{2.78712 cm} } \SetRowColor{DarkBackground} \mymulticolumn{2}{x{5.377cm}}{\bf\textcolor{white}{Achibald Garrod}} \tn % Row 0 \SetRowColor{LightBackground} {\bf{inborn errors of metabolism}} & inherited diseases when a person can't make a specific enzyme (no gene for enzyme bc of mutation) \tn % Row Count 5 (+ 5) % Row 1 \SetRowColor{white} ex. & alkaptonura \tn % Row Count 6 (+ 1) % Row 2 \SetRowColor{LightBackground} & pee is black because no enzyme exists to break down alkapton \tn % Row Count 9 (+ 3) \hhline{>{\arrayrulecolor{DarkBackground}}--} \end{tabularx} \par\addvspace{1.3em} \begin{tabularx}{5.377cm}{x{2.43873 cm} x{2.53827 cm} } \SetRowColor{DarkBackground} \mymulticolumn{2}{x{5.377cm}}{\bf\textcolor{white}{Beadle and Tatum}} \tn % Row 0 \SetRowColor{LightBackground} {\bf{one gene-one polypeptide hypothesis}} & gene dictates the specific production of an enzyme \tn % Row Count 3 (+ 3) % Row 1 \SetRowColor{white} & (gene codes for a polypeptide aka protein aka enzyme) \tn % Row Count 6 (+ 3) \hhline{>{\arrayrulecolor{DarkBackground}}--} \end{tabularx} \par\addvspace{1.3em} \begin{tabularx}{5.377cm}{x{2.24273 cm} x{1.64772 cm} p{0.68655 cm} } \SetRowColor{DarkBackground} \mymulticolumn{3}{x{5.377cm}}{\bf\textcolor{white}{DNA vs. RNA}} \tn % Row 0 \SetRowColor{LightBackground} & DNA & RNA \tn % Row Count 1 (+ 1) % Row 1 \SetRowColor{white} strands & double and anti-parallel & \seqsplit{single} \tn % Row Count 3 (+ 2) % Row 2 \SetRowColor{LightBackground} 3 part of nucleotides: 5-C sugar: & deoxyribose & \seqsplit{ribose} \tn % Row Count 5 (+ 2) % Row 3 \SetRowColor{white} phosphate group: & present & \seqsplit{present} \tn % Row Count 7 (+ 2) % Row 4 \SetRowColor{LightBackground} nitrogenous base & C, G, A, T & C, G, A, U \tn % Row Count 9 (+ 2) \hhline{>{\arrayrulecolor{DarkBackground}}---} \end{tabularx} \par\addvspace{1.3em} \begin{tabularx}{5.377cm}{p{0.4977 cm} x{4.4793 cm} } \SetRowColor{DarkBackground} \mymulticolumn{2}{x{5.377cm}}{\bf\textcolor{white}{3 Types of RNA}} \tn % Row 0 \SetRowColor{LightBackground} mRNA & synthesized using DNA template, attaches to ribosome in cytoplasm and specifies the primary structure of protein \tn % Row Count 4 (+ 4) % Row 1 \SetRowColor{white} rRNA & molecules...and proteins make up the {\emph{ribosomes}} \tn % Row Count 6 (+ 2) % Row 2 \SetRowColor{LightBackground} tRNA & translates between nucleic acid (DNA) and protein lang. by carrying specific amino acids to ribosome, where they recognize the appropriate codons in the mRNA \tn % Row Count 11 (+ 5) \hhline{>{\arrayrulecolor{DarkBackground}}--} \SetRowColor{LightBackground} \mymulticolumn{2}{x{5.377cm}}{PROTEINS ARE ASSEMBLED ON RIBOSOMES} \tn \hhline{>{\arrayrulecolor{DarkBackground}}--} \end{tabularx} \par\addvspace{1.3em} \begin{tabularx}{5.377cm}{x{1.69218 cm} x{3.28482 cm} } \SetRowColor{DarkBackground} \mymulticolumn{2}{x{5.377cm}}{\bf\textcolor{white}{TRANSCRIPTION is DNA-directed synthesis of RNA}} \tn % Row 0 \SetRowColor{LightBackground} eukaryotes & {\emph{nucleus}} (where DNA is) \tn % Row Count 1 (+ 1) % Row 1 \SetRowColor{white} prokaryotes & {\emph{cytoplasm}} \tn % Row Count 2 (+ 1) % Row 2 \SetRowColor{LightBackground} {\bf{RNA polymerase II}} & binds to DNA and separates DNA strands \tn % Row Count 4 (+ 2) % Row 3 \SetRowColor{white} & pastes complimentary RNA nucleotides to one side of DNA strand \tn % Row Count 7 (+ 3) % Row 4 \SetRowColor{LightBackground} & = messenger RNA \tn % Row Count 8 (+ 1) \hhline{>{\arrayrulecolor{DarkBackground}}--} \SetRowColor{LightBackground} \mymulticolumn{2}{x{5.377cm}}{RNA polymerase DOES NOT need a {\emph{primer}}} \tn \hhline{>{\arrayrulecolor{DarkBackground}}--} \end{tabularx} \par\addvspace{1.3em} \begin{tabularx}{5.377cm}{x{1.74195 cm} x{3.23505 cm} } \SetRowColor{DarkBackground} \mymulticolumn{2}{x{5.377cm}}{\bf\textcolor{white}{Transcription (cont.)}} \tn % Row 0 \SetRowColor{LightBackground} {\bf{promoter}} & DNA sequence where RNA polymerase II starts transcribing \tn % Row Count 3 (+ 3) % Row 1 \SetRowColor{white} {\bf{terminator}} & DNA sequence where RNA polymerase II stops transcribing \tn % Row Count 6 (+ 3) % Row 2 \SetRowColor{LightBackground} {\bf{transcription unit}} & the entire stretch of DNA transcribed in mRNA \tn % Row Count 8 (+ 2) \hhline{>{\arrayrulecolor{DarkBackground}}--} \end{tabularx} \par\addvspace{1.3em} \begin{tabularx}{5.377cm}{x{1.34379 cm} x{3.63321 cm} } \SetRowColor{DarkBackground} \mymulticolumn{2}{x{5.377cm}}{\bf\textcolor{white}{3 Stages of Transcription:}} \tn % Row 0 \SetRowColor{LightBackground} {\bf{initiation}} & after RNA polymerase binds to the {\emph{promoter}}, the DNA unwinds and initiates RNA synthesis \tn % Row Count 4 (+ 4) % Row 1 \SetRowColor{white} & {\emph{prokaryotes do this themselves}} \tn % Row Count 6 (+ 2) % Row 2 \SetRowColor{LightBackground} & {\emph{eukaryotes}} use proteins called {\bf{transcription factors}} to assist bind of RNA polymerase to strand \tn % Row Count 10 (+ 4) % Row 3 \SetRowColor{white} & {\bf{TATA box}} helps position mRNA polymerase \tn % Row Count 12 (+ 2) % Row 4 \SetRowColor{LightBackground} {\bf{Elongation}} & RNA polymerase moves downstream, unwinding and elongating \tn % Row Count 14 (+ 2) % Row 5 \SetRowColor{white} {\bf{Termination}} & polymerase transcribes a sequence in DNA signaling end, RNA transcript is released, polymerase detaches from DNA \tn % Row Count 18 (+ 4) \hhline{>{\arrayrulecolor{DarkBackground}}--} \end{tabularx} \par\addvspace{1.3em} \begin{tabularx}{5.377cm}{x{2.4885 cm} x{2.4885 cm} } \SetRowColor{DarkBackground} \mymulticolumn{2}{x{5.377cm}}{\bf\textcolor{white}{Modifying mRNA after Transcription}} \tn % Row 0 \SetRowColor{LightBackground} \mymulticolumn{2}{x{5.377cm}}{ends of pre-mRNA molecule are modified before leaving the nucleus} \tn % Row Count 2 (+ 2) % Row 1 \SetRowColor{white} {\bf{GTP cap}} & 5' end receives guanine triphosphate cap \tn % Row Count 4 (+ 2) % Row 2 \SetRowColor{LightBackground} {\bf{poly-A tail}} & 3' end gets adenine nucleotides \tn % Row Count 6 (+ 2) % Row 3 \SetRowColor{white} RNA is made of : & exons (expresses code) and introns {\emph{from DNA}} \tn % Row Count 9 (+ 3) % Row 4 \SetRowColor{LightBackground} & INTRONS are cut out, while EXONS are spliced together by {\bf{RNA splicing}} \tn % Row Count 13 (+ 4) % Row 5 \SetRowColor{white} RNA splicing signals are at both ends of an INTRON & protein {\bf{spliceosome}} snips out intron from transcript \tn % Row Count 16 (+ 3) % Row 6 \SetRowColor{LightBackground} & enzyme of protein = {\bf{ribozymes}} \tn % Row Count 18 (+ 2) \hhline{>{\arrayrulecolor{DarkBackground}}--} \end{tabularx} \par\addvspace{1.3em} \begin{tabularx}{5.377cm}{x{1.9908 cm} x{2.9862 cm} } \SetRowColor{DarkBackground} \mymulticolumn{2}{x{5.377cm}}{\bf\textcolor{white}{Genetic Code}} \tn % Row 0 \SetRowColor{LightBackground} DNA and RNA & polymers of {\emph{nucleotides}} \tn % Row Count 2 (+ 2) % Row 1 \SetRowColor{white} nucleotides differ in bases & A,T,C,G vs. A,U,C,G \tn % Row Count 4 (+ 2) % Row 2 \SetRowColor{LightBackground} {\bf{Genetic code}} & 'language' of mRNA instructions \tn % Row Count 6 (+ 2) % Row 3 \SetRowColor{white} {\bf{codon}} & mRNA, 3-letter word \tn % Row Count 7 (+ 1) % Row 4 \SetRowColor{LightBackground} & 3 nucleotide that code for an {\emph{amino acid}} \tn % Row Count 9 (+ 2) % Row 5 \SetRowColor{white} UCG = & amino acid {\emph{methionine}} \tn % Row Count 10 (+ 1) % Row 6 \SetRowColor{LightBackground} {\bf{proteins}} & amino acids join in polypeptide \tn % Row Count 12 (+ 2) % Row 7 \SetRowColor{white} \mymulticolumn{2}{x{5.377cm}}{ALL proteins have a start (AUG) and terminator codon} \tn % Row Count 14 (+ 2) \hhline{>{\arrayrulecolor{DarkBackground}}--} \end{tabularx} \par\addvspace{1.3em} \begin{tabularx}{5.377cm}{x{1.89126 cm} x{3.08574 cm} } \SetRowColor{DarkBackground} \mymulticolumn{2}{x{5.377cm}}{\bf\textcolor{white}{Translation}} \tn % Row 0 \SetRowColor{LightBackground} prokaryotes \& eukaryotes & {\emph{cytoplasm on the ribosome}} \tn % Row Count 2 (+ 2) % Row 1 \SetRowColor{white} mRNA & left nucleus, now in cytoplasm, {\emph{binds to ribosome}} \tn % Row Count 5 (+ 3) % Row 2 \SetRowColor{LightBackground} rRNA & ribosome composed of rRNA and protein; adds amino acids to polypeptide chain \tn % Row Count 9 (+ 4) % Row 3 \SetRowColor{white} - 3 binding sites: & {\bf{A site}}: holds the tRNA that carries the next amino acid \tn % Row Count 12 (+ 3) % Row 4 \SetRowColor{LightBackground} & {\bf{P site}}: holds the tRNA that carries the growing polypeptide chain \tn % Row Count 15 (+ 3) % Row 5 \SetRowColor{white} & {\bf{E site}}: exit site for tRNA \tn % Row Count 17 (+ 2) % Row 6 \SetRowColor{LightBackground} tRNA & transfers amino acids to ribosome \tn % Row Count 19 (+ 2) % Row 7 \SetRowColor{white} & other end of tRNA has {\bf{anti-codon}} \tn % Row Count 21 (+ 2) \hhline{>{\arrayrulecolor{DarkBackground}}--} \SetRowColor{LightBackground} \mymulticolumn{2}{x{5.377cm}}{- reference drawing for explanation -} \tn \hhline{>{\arrayrulecolor{DarkBackground}}--} \end{tabularx} \par\addvspace{1.3em} \begin{tabularx}{5.377cm}{X} \SetRowColor{DarkBackground} \mymulticolumn{1}{x{5.377cm}}{\bf\textcolor{white}{\_}} \tn % Row 0 \SetRowColor{LightBackground} \mymulticolumn{1}{x{5.377cm}}{{\bf{polyribosomes}}} \tn % Row Count 1 (+ 1) % Row 1 \SetRowColor{white} \mymulticolumn{1}{x{5.377cm}}{mRNA can be translated simultaneously by {\emph{several}} ribosomes} \tn % Row Count 3 (+ 2) \hhline{>{\arrayrulecolor{DarkBackground}}-} \SetRowColor{LightBackground} \mymulticolumn{1}{x{5.377cm}}{transcription / translation of BACTERIA cells occurs at same time because they're both in the CYTOPLASM} \tn \hhline{>{\arrayrulecolor{DarkBackground}}-} \end{tabularx} \par\addvspace{1.3em} \begin{tabularx}{5.377cm}{X} \SetRowColor{DarkBackground} \mymulticolumn{1}{x{5.377cm}}{\bf\textcolor{white}{Mutations}} \tn % Row 0 \SetRowColor{LightBackground} \mymulticolumn{1}{x{5.377cm}}{alteration in the genetic information of a cell} \tn % Row Count 1 (+ 1) % Row 1 \SetRowColor{white} \mymulticolumn{1}{x{5.377cm}}{{\bf{point mutation}} - affects one nucleotide pair} \tn % Row Count 2 (+ 1) % Row 2 \SetRowColor{LightBackground} \mymulticolumn{1}{x{5.377cm}}{{\bf{nucleotide-pair substitution}} - replacement of one nucleotide and it's complementary base pair in DNA} \tn % Row Count 5 (+ 3) % Row 3 \SetRowColor{white} \mymulticolumn{1}{x{5.377cm}}{1. {\bf{silent mutations}} do not change amino acid translation} \tn % Row Count 7 (+ 2) % Row 4 \SetRowColor{LightBackground} \mymulticolumn{1}{x{5.377cm}}{2. {\bf{missense mutation}} substitution when a codon still codes for an amino acid} \tn % Row Count 9 (+ 2) % Row 5 \SetRowColor{white} \mymulticolumn{1}{x{5.377cm}}{3. {\bf{nonsense mutations}} - substitutions when a regular amino acid codon is changed into a stop codon, ending translation} \tn % Row Count 12 (+ 3) \hhline{>{\arrayrulecolor{DarkBackground}}-} \end{tabularx} \par\addvspace{1.3em} \begin{tabularx}{5.377cm}{X} \SetRowColor{DarkBackground} \mymulticolumn{1}{x{5.377cm}}{\bf\textcolor{white}{Mutations (cont.)}} \tn % Row 0 \SetRowColor{LightBackground} \mymulticolumn{1}{x{5.377cm}}{{\bf{insertion and deletion}} - addition / loss of nucleotide pairs, can cause {\emph{frameshift}}, mRNA read wrong} \tn % Row Count 3 (+ 3) % Row 1 \SetRowColor{white} \mymulticolumn{1}{x{5.377cm}}{{\bf{mutagens}} - forces that interact with DNA in ways that cause mutation} \tn % Row Count 5 (+ 2) % Row 2 \SetRowColor{LightBackground} \mymulticolumn{1}{x{5.377cm}}{ex. x-rays} \tn % Row Count 6 (+ 1) \hhline{>{\arrayrulecolor{DarkBackground}}-} \SetRowColor{LightBackground} \mymulticolumn{1}{x{5.377cm}}{REMEMBER: \newline - most genes only contain instructions for assembling proteins \newline - many proteins = enzyme \newline - can control color of a flower} \tn \hhline{>{\arrayrulecolor{DarkBackground}}-} \end{tabularx} \par\addvspace{1.3em} % That's all folks \end{multicols*} \end{document}