\documentclass[10pt,a4paper]{article} % Packages \usepackage{fancyhdr} % For header and footer \usepackage{multicol} % Allows multicols in tables \usepackage{tabularx} % Intelligent column widths \usepackage{tabulary} % Used in header and footer \usepackage{hhline} % Border under tables \usepackage{graphicx} % For images \usepackage{xcolor} % For hex colours %\usepackage[utf8x]{inputenc} % For unicode character support \usepackage[T1]{fontenc} % Without this we get weird character replacements \usepackage{colortbl} % For coloured tables \usepackage{setspace} % For line height \usepackage{lastpage} % Needed for total page number \usepackage{seqsplit} % Splits long words. %\usepackage{opensans} % Can't make this work so far. Shame. Would be lovely. \usepackage[normalem]{ulem} % For underlining links % Most of the following are not required for the majority % of cheat sheets but are needed for some symbol support. \usepackage{amsmath} % Symbols \usepackage{MnSymbol} % Symbols \usepackage{wasysym} % Symbols %\usepackage[english,german,french,spanish,italian]{babel} % Languages % Document Info \author{ACD Marketing Team (ACD Marketing)} \pdfinfo{ /Title (neuroscience.pdf) /Creator (Cheatography) /Author (ACD Marketing Team (ACD Marketing)) /Subject (Neuroscience Cheat Sheet) } % Lengths and widths \addtolength{\textwidth}{6cm} \addtolength{\textheight}{-1cm} \addtolength{\hoffset}{-3cm} \addtolength{\voffset}{-2cm} \setlength{\tabcolsep}{0.2cm} % Space between columns \setlength{\headsep}{-12pt} % Reduce space between header and content \setlength{\headheight}{85pt} % If less, LaTeX automatically increases it \renewcommand{\footrulewidth}{0pt} % Remove footer line \renewcommand{\headrulewidth}{0pt} % Remove header line \renewcommand{\seqinsert}{\ifmmode\allowbreak\else\-\fi} % Hyphens in seqsplit % This two commands together give roughly % the right line height in the tables \renewcommand{\arraystretch}{1.3} \onehalfspacing % Commands \newcommand{\SetRowColor}[1]{\noalign{\gdef\RowColorName{#1}}\rowcolor{\RowColorName}} % Shortcut for row colour \newcommand{\mymulticolumn}[3]{\multicolumn{#1}{>{\columncolor{\RowColorName}}#2}{#3}} % For coloured multi-cols \newcolumntype{x}[1]{>{\raggedright}p{#1}} % New column types for ragged-right paragraph columns \newcommand{\tn}{\tabularnewline} % Required as custom column type in use % Font and Colours \definecolor{HeadBackground}{HTML}{333333} \definecolor{FootBackground}{HTML}{666666} \definecolor{TextColor}{HTML}{333333} \definecolor{DarkBackground}{HTML}{005A9B} \definecolor{LightBackground}{HTML}{EFF4F8} \renewcommand{\familydefault}{\sfdefault} \color{TextColor} % Header and Footer \pagestyle{fancy} \fancyhead{} % Set header to blank \fancyfoot{} % Set footer to blank \fancyhead[L]{ \noindent \begin{multicols}{3} \begin{tabulary}{5.8cm}{C} \SetRowColor{DarkBackground} \vspace{-7pt} {\parbox{\dimexpr\textwidth-2\fboxsep\relax}{\noindent \hspace*{-6pt}\includegraphics[width=5.8cm]{/web/www.cheatography.com/public/images/cheatography_logo.pdf}} } \end{tabulary} \columnbreak \begin{tabulary}{11cm}{L} \vspace{-2pt}\large{\bf{\textcolor{DarkBackground}{\textrm{Neuroscience Cheat Sheet}}}} \\ \normalsize{by \textcolor{DarkBackground}{ACD Marketing Team (ACD Marketing)} via \textcolor{DarkBackground}{\uline{cheatography.com/36805/cs/11592/}}} \end{tabulary} \end{multicols}} \fancyfoot[L]{ \footnotesize \noindent \begin{multicols}{3} \begin{tabulary}{5.8cm}{LL} \SetRowColor{FootBackground} \mymulticolumn{2}{p{5.377cm}}{\bf\textcolor{white}{Cheatographer}} \\ \vspace{-2pt}ACD Marketing Team (ACD Marketing) \\ \uline{cheatography.com/acd-marketing} \\ \uline{\seqsplit{www}.acdbio.com} \end{tabulary} \vfill \columnbreak \begin{tabulary}{5.8cm}{L} \SetRowColor{FootBackground} \mymulticolumn{1}{p{5.377cm}}{\bf\textcolor{white}{Cheat Sheet}} \\ \vspace{-2pt}Not Yet Published.\\ Updated 28th April, 2017.\\ Page {\thepage} of \pageref{LastPage}. \end{tabulary} \vfill \columnbreak \begin{tabulary}{5.8cm}{L} \SetRowColor{FootBackground} \mymulticolumn{1}{p{5.377cm}}{\bf\textcolor{white}{Sponsor}} \\ \SetRowColor{white} \vspace{-5pt} %\includegraphics[width=48px,height=48px]{dave.jpeg} Measure your website readability!\\ www.readability-score.com \end{tabulary} \end{multicols}} \begin{document} \raggedright \raggedcolumns % Set font size to small. Switch to any value % from this page to resize cheat sheet text: % www.emerson.emory.edu/services/latex/latex_169.html \footnotesize % Small font. \begin{multicols*}{2} \begin{tabularx}{8.4cm}{X} \SetRowColor{DarkBackground} \mymulticolumn{1}{x{8.4cm}}{\bf\textcolor{white}{One Minute Pitch}} \tn \SetRowColor{white} \mymulticolumn{1}{x{8.4cm}}{RNAscope® ISH delivers single-molecule sensitivity and specificity. The {\bf{multiplexing capability}} enables detection of multiple markers at once, enabling exquisite characterization of cell populations, {\bf{co-localization/ co-expression}} studies and also {\bf{sub-cellular localization}} of mRNA within the nervous system. Combine with {\bf{Immunohistochemistry/ IF}}. {\bf{Same-day}} results and automated assays mean you can get the data you seek quickly, easily, and all backed by our performance guarantee.% Row Count 11 (+ 11) } \tn \hhline{>{\arrayrulecolor{DarkBackground}}-} \end{tabularx} \par\addvspace{1.3em} \begin{tabularx}{8.4cm}{X} \SetRowColor{DarkBackground} \mymulticolumn{1}{x{8.4cm}}{\bf\textcolor{white}{Key Selling Point}} \tn \SetRowColor{white} \mymulticolumn{1}{x{8.4cm}}{{\bf{Multiplex capability and dual ISH/IHC}}% Row Count 1 (+ 1) } \tn \hhline{>{\arrayrulecolor{DarkBackground}}-} \end{tabularx} \par\addvspace{1.3em} \begin{tabularx}{8.4cm}{X} \SetRowColor{DarkBackground} \mymulticolumn{1}{x{8.4cm}}{\bf\textcolor{white}{Overview}} \tn \SetRowColor{LightBackground} \mymulticolumn{1}{p{8.4cm}}{\vspace{1px}\centerline{\includegraphics[width=5.1cm]{/web/www.cheatography.com/public/uploads/acd-marketing_1493297607_Overview.png}}} \tn \hhline{>{\arrayrulecolor{DarkBackground}}-} \SetRowColor{LightBackground} \mymulticolumn{1}{x{8.4cm}}{{\bf{No Antibody?}} Detect GPCRs, Ion Channels, lncRNA \newline {\bf{Validate RNA-Seq Signatures}} in single cells \newline {\bf{Visualize cellular activity in cell type specific manner}} \newline Plasticity markers, Secreted factors, Co-localization \newline {\bf{Characterize specific genetic variations}} \newline Alternative splicing, circRNA} \tn \hhline{>{\arrayrulecolor{DarkBackground}}-} \end{tabularx} \par\addvspace{1.3em} \begin{tabularx}{8.4cm}{X} \SetRowColor{DarkBackground} \mymulticolumn{1}{x{8.4cm}}{\bf\textcolor{white}{Qualifying Questions}} \tn % Row 0 \SetRowColor{LightBackground} \mymulticolumn{1}{x{8.4cm}}{Do you want to explore molecular mechanisms of CNS/PNS development and neurological disorders like Alzheimer, Parkinson, Addictions, Pain, Depression...?} \tn % Row Count 4 (+ 4) % Row 1 \SetRowColor{white} \mymulticolumn{1}{x{8.4cm}}{Do you need to visualize biomarkers co-localization \& expression in specific cellular sub-types?} \tn % Row Count 6 (+ 2) % Row 2 \SetRowColor{LightBackground} \mymulticolumn{1}{x{8.4cm}}{Are you looking for single cell resolution or need to distinguish expression of biomarkers between various nervous system cell types?} \tn % Row Count 9 (+ 3) % Row 3 \SetRowColor{white} \mymulticolumn{1}{x{8.4cm}}{Would you like to visualize sub cellular RNA/protein localization, axon/dendrites RNA transport?} \tn % Row Count 11 (+ 2) % Row 4 \SetRowColor{LightBackground} \mymulticolumn{1}{x{8.4cm}}{Are you investigating expression of splice variants (\textasciitilde{}90\% of genes in the CNS have splice variants involved in specific diseases)?} \tn % Row Count 14 (+ 3) % Row 5 \SetRowColor{white} \mymulticolumn{1}{x{8.4cm}}{Do you need an assay for a non-commun target like for circRNA?} \tn % Row Count 16 (+ 2) \hhline{>{\arrayrulecolor{DarkBackground}}-} \end{tabularx} \par\addvspace{1.3em} \begin{tabularx}{8.4cm}{X} \SetRowColor{DarkBackground} \mymulticolumn{1}{x{8.4cm}}{\bf\textcolor{white}{Pain Points and Our Solutions}} \tn % Row 0 \SetRowColor{LightBackground} \mymulticolumn{1}{x{8.4cm}}{{\bf{Immunohistochemistry}}\{\{nl\}\} {\bf{Pain Point:}} Lack of \seqsplit{antibody/specificity/secreted} proteins/ lncRNA \{\{nl\}\}{\bf{Our Solution:}} Detection of any gene/ species/ tissue with highest specificity, new probe in 2 weeks, multiplex – up to 4 RNAs + 2 IHC targets. Co-expression studies with cell type markers, sub-cellular localization possible, detection of GPCRs/ Ion Channels} \tn % Row Count 8 (+ 8) % Row 1 \SetRowColor{white} \mymulticolumn{1}{x{8.4cm}}{{\bf{Conventional ISH}}\{\{nl\}\} {\bf{Paint Point:}} Considered as complicated, long assay, dual ISH/IHC possible but really tricky
\{\{nl\}\}{\bf{Our Solution:}} One day assay (not V2), easy-to-use, stable assay, great tech support (new user program), probe in depended optimization} \tn % Row Count 14 (+ 6) % Row 2 \SetRowColor{LightBackground} \mymulticolumn{1}{x{8.4cm}}{{\bf{RNA-Seq/ RT-PCR}}\{\{nl\}\} {\bf{Pain Point:}} Give up tissue context, quantity of RNA required for qPCR is higher
\{\{nl\}\}{\bf{Our Solution:}} Morphological context with single-cell specificity} \tn % Row Count 18 (+ 4) \hhline{>{\arrayrulecolor{DarkBackground}}-} \end{tabularx} \par\addvspace{1.3em} \begin{tabularx}{8.4cm}{X} \SetRowColor{DarkBackground} \mymulticolumn{1}{x{8.4cm}}{\bf\textcolor{white}{Recommended Products}} \tn % Row 0 \SetRowColor{LightBackground} \mymulticolumn{1}{x{8.4cm}}{{\bf{RNAscope® Fluorescent Multiplex}} (320850) for fresh \& fixed frozen \{\{nl\}\}C1/C3: stronger channel (low expressor), C2: slightly weaker channel \{\{nl\}\}} \tn % Row Count 4 (+ 4) % Row 1 \SetRowColor{white} \mymulticolumn{1}{x{8.4cm}}{{\bf{RNAscope® Multiplex Fluorescent v2}} (323110) up to 4 targets, but ideal for FFPE, 4-plex: They need 4-Plex Ancillary Kit (323120)} \tn % Row Count 7 (+ 3) % Row 2 \SetRowColor{LightBackground} \mymulticolumn{1}{x{8.4cm}}{{\bf{RNAscope® 2.5 HD Duplex Reagent Kit}} (322430)} \tn % Row Count 8 (+ 1) % Row 3 \SetRowColor{white} \mymulticolumn{1}{x{8.4cm}}{{\bf{BaseScope}} for splice variants, circRNA} \tn % Row Count 9 (+ 1) \hhline{>{\arrayrulecolor{DarkBackground}}-} \end{tabularx} \par\addvspace{1.3em} \begin{tabularx}{8.4cm}{X} \SetRowColor{DarkBackground} \mymulticolumn{1}{x{8.4cm}}{\bf\textcolor{white}{Our Limitations}} \tn % Row 0 \SetRowColor{LightBackground} \mymulticolumn{1}{x{8.4cm}}{{\bf{Multiplexing}}= With V2 6 Opal fluorophores available \{\{nl\}\}(Theoretically 4x RNA, 2x protein as we only have 4 channels)} \tn % Row Count 3 (+ 3) % Row 1 \SetRowColor{white} \mymulticolumn{1}{x{8.4cm}}{{\bf{ISH/IF}}= We can not guarantee results as depending on the antibody.} \tn % Row Count 5 (+ 2) \hhline{>{\arrayrulecolor{DarkBackground}}-} \end{tabularx} \par\addvspace{1.3em} \begin{tabularx}{8.4cm}{X} \SetRowColor{DarkBackground} \mymulticolumn{1}{x{8.4cm}}{\bf\textcolor{white}{Most Published Targets:}} \tn % Row 0 \SetRowColor{LightBackground} \mymulticolumn{1}{x{8.4cm}}{Gad1, Drd2, Drd1, VGluT2, Gad2, Th, Sst, EGFP, Shh, Vgat} \tn % Row Count 2 (+ 2) \hhline{>{\arrayrulecolor{DarkBackground}}-} \end{tabularx} \par\addvspace{1.3em} \begin{tabularx}{8.4cm}{X} \SetRowColor{DarkBackground} \mymulticolumn{1}{x{8.4cm}}{\bf\textcolor{white}{Long non-coding RNA in Neuroscience - examples}} \tn \SetRowColor{white} \mymulticolumn{1}{x{8.4cm}}{Alzheimer's disease (BACE1-AS, SORL1, lncRNA 51A…)\{\{nl\}\}Schizophrenia (Gomafu, DISC2…)\{\{nl\}\}Autism spectrum disorder (MSNP1AS)\{\{nl\}\}Parkinson's disease (AL049437, AK021630...)\{\{nl\}\}Huntington's disease (Neat1)% Row Count 5 (+ 5) } \tn \hhline{>{\arrayrulecolor{DarkBackground}}-} \end{tabularx} \par\addvspace{1.3em} \begin{tabularx}{8.4cm}{X} \SetRowColor{DarkBackground} \mymulticolumn{1}{x{8.4cm}}{\bf\textcolor{white}{Key Tools/ References:}} \tn \SetRowColor{white} \mymulticolumn{1}{x{8.4cm}}{App Note, App Review, Probe List, Publication List - http://bit.ly/2oN1lum \newline % Row Count 2 (+ 2) GPCR Video - \seqsplit{https://www.youtube.com/watch?v=SFjUVZGdToc} \newline % Row Count 4 (+ 2) Several PubCrushs/ scientific posters - please check Showpad% Row Count 6 (+ 2) } \tn \hhline{>{\arrayrulecolor{DarkBackground}}-} \end{tabularx} \par\addvspace{1.3em} % That's all folks \end{multicols*} \end{document}